DRSC/TRiP Functional Genomics Resources

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Protein Alignment viaf and PDCL

DIOPT Version :10

Sequence 1:NP_524032.2 Gene:viaf / 39364 FlyBaseID:FBgn0036237 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_005379.3 Gene:PDCL / 5082 HGNCID:8770 Length:301 Species:Homo sapiens


Alignment Length:217 Identity:66/217 - (30%)
Similarity:107/217 - (49%) Gaps:21/217 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KGIIGP----KAKEAEITEDQIQKLMDDAIQR-----RTDLPLNEGQRDKK------IDDMSLDE 66
            ||:|..    |..|.|..|:|.:: |:..|::     |:.|...|.|:.:|      ...|:|.|
Human    60 KGVINDWRRFKQLETEQREEQCRE-MERLIKKLSMTCRSHLDEEEEQQKQKDLQEKISGKMTLKE 123

  Fly    67 LDEL-EDSEDEAVLEQYRQRRIAEMRATAEKA-RFGSVREI-SGQDYVNEVTKAGEGIWVVLHLY 128
            ...: ||.:||..|:|||::|:.|||....|. :|..|.|| ||:.:::.:.|..:.|.:::|:|
Human   124 FAIMNEDQDDEEFLQQYRKQRMEEMRQQLHKGPQFKQVFEISSGEGFLDMIDKEQKSIVIMVHIY 188

  Fly   129 ANGVPLCALIHHHMQQLAVRFPQTKF--VRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLE 191
            .:|:|....::..|..||..:|..||  |:|........|....||.:.||..|.|...::...:
Human   189 EDGIPGTEAMNGCMICLAAEYPAVKFCKVKSSVIGASSQFTRNALPALLIYKGGELIGNFVRVTD 253

  Fly   192 LRGDKLTAEELEFMLGQAGAVP 213
            ..||...|.:||..|.:.|.:|
Human   254 QLGDDFFAVDLEAFLQEFGLLP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
viafNP_524032.2 Phd_like_VIAF 8..210 CDD:239286 64/212 (30%)
PDCLNP_005379.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..57
Phosducin 36..299 CDD:251094 66/217 (30%)
Blue background indicates that the domain is not in the aligned region.

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