Protein Alignment viaf and pdca

DIOPT Version :10

• Sequence 1: NP_524032.2
• Gene: viaf / 39364
• FlyBaseID: FBgn0036237
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_001278429.1
• Gene: pdca / 386613
• ZFINID: ZDB-GENE-031023-1
• Length: 236
• Species: Danio rerio
• Alignment Length: 227
• Identity: 56/227 - (24%)
• Similarity: 111/227 - (48%)
• Gaps: 18/227 - (7%)

  Fly    17 KGIIGPKAKEAEITED--QIQKLMDDAIQRRTDLPLNEGQRDKKIDDMSLDELDELEDSEDEAVL 79
            ||:|....|....:||  .|.....:.:::.::...::..|:|....||:.|.:.::: |||..|
Zfish    18 KGVIHDWRKFKLESEDHESIPSNKRELLRQMSNPKSSDDPREKVNRKMSVQEYEMIQE-EDEQCL 81

  Fly    80 EQYRQRRIAEMRATAEKARFG----SVREI-SGQDYVNEVTKAGEGIWVVLHLYANGVPLCALIH 139
            .:||::.:.:|.   |:..||    ||.:: ||:.:::.:........||:|:|.:|:..|..::
Zfish    82 RKYRKQCMQDMH---ERLSFGPKFDSVFDLESGEAFLDVIENEHRLTLVVVHIYEDGIRGCDALN 143

  Fly   140 HHMQQLAVRFPQTKF--VRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAEEL 202
            :.:..||..:...||  :|:.||.....|.|..|||:.:|..|.:...::...:...::..|.::
Zfish   144 NCLTCLAAEYSTVKFCRIRASATGAGERFSEDVLPTLLVYKAGEMLGNFLCVTKHMNEEFFATDV 208

  Fly   203 EFMLGQAGAVP-TEITEDPRPQIRDKMLADLE 233
            |..|.:.|.:| .|....|    .::..||:|
Zfish   209 ENFLNEYGLLPEKEFAASP----DEEENADVE 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
viaf	NP_524032.2	Phd_like_VIAF	8..210	CDD:239286	49/201 (24%)
pdca	NP_001278429.1	Phosducin	2..222	CDD:251094	51/207 (25%)