Protein Alignment viaf and pdcl

DIOPT Version :10

• Sequence 1: NP_524032.2
• Gene: viaf / 39364
• FlyBaseID: FBgn0036237
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_955941.2
• Gene: pdcl / 323645
• ZFINID: ZDB-GENE-030131-2365
• Length: 306
• Species: Danio rerio
• Alignment Length: 245
• Identity: 68/245 - (27%)
• Similarity: 122/245 - (49%)
• Gaps: 26/245 - (10%)

  Fly    17 KGIIGPKAKEAEITEDQ---IQKLMDDAIQR-----RTDLPLN-EGQRDKKIDD-------MSLD 65
            ||:|....|..::..:|   .||.|:..|::     ::.|... :.|:.|::.|       :.:|
Zfish    61 KGVINDWRKYKQLENEQRIEQQKEMEKLIKKLSMTCKSHLEEEADKQKQKELQDKLTGKLNLRVD 125

  Fly    66 ELDELEDSEDEAVLEQYRQRRIAEM-RATAEKARFGSVREI-SGQDYVNEVTKAGEGIWVVLHLY 128
            | :|.||.:|||.|:|||.:|:.:| |......||..|.:| ||::::..|.:.|:...|::|:|
Zfish   126 E-EEEEDDDDEAFLQQYRLQRMEQMRRQLCGGRRFEKVMDISSGEEFLRAVDEEGKSTLVLVHIY 189

  Fly   129 ANGVPLCALIHHHMQQLAVRFPQTKFVR----SVATTCIPNFPEKNLPTIFIYHEGALRKQYIGP 189
            ...||.|..:...:..||:::|..||.|    :|.|:.:  |....||.:.:|..|.|....:..
Zfish   190 EPEVPACQAMDGSLLCLALQYPMVKFCRVRGSAVGTSAL--FRSSALPALLLYRGGDLVGNLVRV 252

  Fly   190 LELRGDKLTAEELEFMLGQAGAVPTEITE-DPRPQIRDKMLADLEDKSSD 238
            .:..||...|.::|.:|.:.|.:|.:..: :....||:..:...:|..||
Zfish   253 SDQLGDDFYATDVEALLQEYGLLPEKYAQPNTHSSIRNAAVTHPDDSDSD 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
viaf	NP_524032.2	Phd_like_VIAF	8..210	CDD:239286	61/214 (29%)
pdcl	NP_955941.2	Phosducin	46..295	CDD:251094	65/236 (28%)