DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and obst-J

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster


Alignment Length:270 Identity:74/270 - (27%)
Similarity:112/270 - (41%) Gaps:43/270 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 CIGQDDGSAVADKSNCSLFYVCS-NNTATAQE--CPEGSYFESNNWGCVPGTCTTESPCDDSTTT 272
            |...|....:..|.:|..||||: ::....||  ||...:|......||||.||.|         
  Fly    30 CRISDPWQMLPHKDHCQRFYVCTGDDDMPFQEFNCPAEYHFSKKLMICVPGACTDE--------- 85

  Fly   273 TTESCAEETTEPPASCDCGDIKNADFIPDEENCRKYFICID-GVLVAADCGKGNVFNANLSVC-- 334
                          |..||...:.:.:  :.:|.:|..|:: |....|.|..||.|:.....|  
  Fly    86 --------------SVFCGLTNSVERV--QSDCTRYRQCLEGGSFAVAKCSVGNYFDPARRACLP 134

  Fly   335 -EVDADNTC-CVADCTDGEAKVDPQDCTKYFKCQSGDWTSVSCDSGSYFNETLNCCQVDVNNVCI 397
             .:.|.:.| ||  ..|.....:|.||..||:|.||....|.|.||.||:|.::.|..|...:|:
  Fly   135 VAISAAHQCSCV--LPDNATLANPSDCETYFRCHSGQAELVQCPSGDYFDERVSSCVPDHTGICL 197

  Fly   398 DAKSNSTQIPTTSTVETSSVDKC---NAKDPPASGKNCWTYQHCISGQWEDGTCPNNTYFDASVG 459
            :..:    :|.|.|.:..::|:|   .::..|.| ::|..|..|...:..:..||...|||....
  Fly   198 EKPT----MPPTLTEQALAMDECIRTGSRLAPHS-RDCQRYYICAKKRVLEMRCPRGQYFDVVRR 257

  Fly   460 ICREDTENVC 469
            .|..|..:.|
  Fly   258 YCALDLGSEC 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884
CBM_14 153..206 CDD:279884
CBM_14 211..257 CDD:279884 14/48 (29%)
CBM_14 298..343 CDD:279884 12/49 (24%)
CBM_14 354..395 CDD:279884 17/40 (43%)
CBM_14 427..468 CDD:279884 11/40 (28%)
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:279884
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 12/38 (32%)
CBM_14 145..192 CDD:279884 19/48 (40%)
CBM_14 216..259 CDD:279884 11/43 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444074
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D29657at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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