DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43896 and Muc68D

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_648504.2 Gene:Muc68D / 39326 FlyBaseID:FBgn0036203 Length:1514 Species:Drosophila melanogaster


Alignment Length:1899 Identity:344/1899 - (18%)
Similarity:577/1899 - (30%) Gaps:559/1899 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 WV-------NYCIGQDDGSAVADKSNCSLFYVC------SNNTATAQECPEGSYFESNNWGCVPG 258
            |:       ::|.||..||...|..:...:|:|      ..||     |..|..|::.:.|||..
  Fly    12 WILPKALGKDFCAGQSFGSRAVDSEDPQSYYLCLGFIGPIKNT-----CKNGYLFDAQSQGCVIM 71

  Fly   259 TCTTESPCDDSTTTTTESCAEETTEPPASCDCGDIKNADFIPDEENCRKYFICIDGVLVAADCGK 323
            ...|:|                            ||.::....|... |..|.:|..|:....|.
  Fly    72 NNATQS----------------------------IKKSNDHKKEVTI-KQNISVDRPLIFNIFGN 107

  Fly   324 GNVF-----NANLSVCEVDADNTCCVADCTDGEAKVDPQDCTKYFKCQSGDWTSVSCDSGSYFNE 383
            .|.|     |::.:.......|........:....::|............|..|.|.||....:.
  Fly   108 FNFFASLWGNSHETTPSPLKPNPIAHFQFINSAVGIEPLSQDNLADKDKKDIISSSSDSSPTEDA 172

  Fly   384 TLNCCQVDVNNVCIDAKS-NSTQIPTT----STVETSSVDKCNAKDPPASGKNCWTYQHCIS--- 440
            |.:..||....|..||.| .|.|..||    |:.:.|...:.:..|...|.::....:...:   
  Fly   173 TYSSTQVSSTQVPEDASSAESIQESTTQGSRSSTDISLSTEASLDDIILSSESIVPTESSTTIIS 237

  Fly   441 ----GQWED--------GTCPNNTYFDASVGICRE---DTENVCPENRSSG----SRQKRSVEDC 486
                |.||.        |:...:...:|...:.:|   .:|:......|:|    |....|:.|.
  Fly   238 SSTEGSWESHISTDSSIGSKVESLLIEALYSLIQESSSSSESPVSNEPSTGATDDSSSTESLPDS 302

  Fly   487 TCEGGIAQGTIIGH--STDCDKYLICENGQLVEGVCGVGNVFQKSSGICVPDTKATCWVCSNKPN 549
            |.|...:..:.:..  ||:...                    :.||...:|:: :|....|:...
  Fly   303 TQESSSSSESPVSFELSTEATN--------------------ESSSSESLPNS-STQDSSSSTET 346

  Fly   550 GYQMADPTDCT----------------SYLTCWNGLATKH----TCGSGEWYNGDGNCVIDVNAK 594
            .:|....||.|                |..:....|:|:.    |..|....:...:...:.::.
  Fly   347 SFQTESTTDATDESSSTESQPDSTTQESSSSTEGPLSTESSTAVTDQSSSTESSQDSTTQESSSS 411

  Fly   595 CINPCSCGNGNVAHPICTNYFQCTDGVPQVKQCVVGEAFDSATGQCST--TVECSAKNCATAS-- 655
            ...|.|..:...|    ||....|:   ..:.....|:..|..|..||  :.|.:.::.:|.|  
  Fly   412 TEGPLSTESSTEA----TNESSSTE---SSQDSTTQESSSSTEGPLSTESSTEATNESSSTESSQ 469

  Fly   656 DGTTYPVAGET-GQFYVCLSNEATIQPCPVNTGYSAALGICLDQPSPDCDQTICNSAAVDSTYPS 719
            |.||...:..| |......|.|||.:.....:...:.    ..:.|...:..:...::.::|..|
  Fly   470 DSTTQESSSSTEGPLSTESSTEATNESSSTESSQDST----TQESSSSSEGPLSTESSTEATNES 530

  Fly   720 NDNDSSTFCLCRDSGAYI-------------QSCPTGLFYDATDQVCTFSGNCDP-------QVC 764
            :..:||.....::|.:..             :|..|....|:|.|..: |...||       :..
  Fly   531 SSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESS-SSTEDPLSTESSTEAT 594

  Fly   765 NDQSEYFVSPD---YEDPNSFCLCRAGEPITVSCPIG--YTFNTEELECVLIPLPDPRCCANGCS 824
            |:.|....|.|   .|..:|    ..|...|.|...|  .:.:||..:       |.....:..|
  Fly   595 NESSSTESSQDSTTQESSSS----TEGPLSTESSTEGSNESSSTESSQ-------DSTTQKSSSS 648

  Fly   825 GKTDFSTFPTIEGTDGFCLCVDDVPKYISCPENSQYDL--ELGACT----ATEEETTCPVNACTV 883
            .::..||.|:.|..:.            |..|:||...  |..:.|    :||..|....::.| 
  Fly   649 TESPLSTEPSTEANES------------SSTESSQDSTTQESSSSTEGPLSTEPSTEANESSST- 700

  Fly   884 GICESALDFNTFPVSSDPSGFCYCLDSCPIYET----CLDDLVYNEDLKRCTEP--EDPSVVSRC 942
               ||:.|..|...||...|......|....|:    ...|....|.......|  .:||..:. 
  Fly   701 ---ESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTESPLSTEPSTEAN- 761

  Fly   943 DAEKCDSIPDFTPYPSINGTDGFCYCNGGLPVFRE--CEENQEFDPAVGFCRTVVDSCVTALCDA 1005
            ::...:|..|.|...|.:.|:|        |:..|  .|.|:.            .|..::....
  Fly   762 ESSSTESSQDSTTQESSSSTEG--------PLSTEPSTEANES------------SSTESSQDST 806

  Fly  1006 NQCATLDNYVPFPT--NTASDDDGAFCYCKDGEVILEQCSPEMVFSADLGRCTVQAAPECVCAPG 1068
            .|.::..:..|..|  :|.:::..:....:|........|.|...|       .:::.|......
  Fly   807 TQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTEDPLS-------TESSTEATYESS 864

  Fly  1069 KCGSSDGYTTYEALNTNEGFCLCVSGTPVFTE-CLNGETYNSILGACFSSTAKIIASGLCDDRRC 1132
            ...||...||.|:.::.||        |:.|| ...|...:|...:...||.:  .|....:...
  Fly   865 STESSQDSTTQESSSSTEG--------PLSTESSTEGSNESSSTESSQDSTTQ--ESSSSTESPL 919

  Fly  1133 HSRAVVDATFAAVNTTSGYCSCQDVGVSTFINCADEHVYEESAGTCVVAACDYTSCLNRVAFE-P 1196
            .:....:|..::...:|...:.|:...||....:.|...|.:..:...::.|.|:..:..:.| |
  Fly   920 STEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEANESSSTESSQDSTTQESSSSTEGP 984

  Fly  1197 FEAKNTTEGFCSCDGVPYFHQCQTGHVFDKAQGICLLKDTMAMISCNLRECLKRSQFEPFAAE-N 1260
            ...:::|||                  .:::......:|:....|.:..|       .|.:.| :
  Fly   985 LSTESSTEG------------------SNESSSTESSQDSTTQESSSSTE-------SPLSTEPS 1024

  Fly  1261 TNSGFCSCDDLQRVSVTYHPCGEGEIFAPEFGMCTSHSIQKRSVEAEENICISNEMRSVPANCSQ 1325
            |.:...|..:..:.|.|.......|      |..::.|    |.||      |||..|.      
  Fly  1025 TEANESSSTESSQDSTTQESSSSTE------GPLSTES----STEA------SNESSST------ 1067

  Fly  1326 YEMCIDGRWRRRTCSDQRYYNPEQ--QRCLEPRDDLVCAYARVSNIPTCTAISESMTIPAKSGNC 1388
             |...|...:..:.|.:...:.|.  :...||........:.....| ||..:.|...|:     
  Fly  1068 -ESSQDSTTQESSSSTEGPLSTESSTEVTQEPSPTESLPNSSTQGTP-CTTDNPSSLEPS----- 1125

  Fly  1389 MQYFRCSGGKWRLRNCPKQHYYSPLIGSCLPFPRGHEQDRNQTICSWAMSKLAGNSSDDCQHLAV 1453
                                          |...|::.|             :|||..:..:.:.
  Fly  1126 ------------------------------PSTPGNDDD-------------SGNSGSENGNSST 1147

  Fly  1454 RPSLAGGCQSYLMCLDNSWWLHQCPLGMYFSREHNYCLP-NDAGQCILPAERSGN--CSNGESRS 1515
            ..|                   .|........|.:...| ||        :.|||  ..||.|.:
  Fly  1148 SGS-------------------PCTTDNPSDPESSSSTPGND--------DDSGNSGSENGNSST 1185

  Fly  1516 VVGSCHSYEVCSDNGQWIRRRCQEREQFEPMLGCVPSD--------GSCQDNGMRRICREGELQA 1572
            ....|     .:||                     |||        |:..|:             
  Fly  1186 SGSPC-----TTDN---------------------PSDPESSSSTPGNDDDS------------- 1211

  Fly  1573 QFGNNCSQGFLYCEAEEWHLGSCLKGHSFARNRNKCQLQSQCQLQIRDLPAENQCLGQIDGLSVP 1637
              ||:.|:..:          :...|..:..:....|..|         |:..:..|.....|..
  Fly  1212 --GNSGSESGI----------TSTTGAPYTTDNPASQEPS---------PSAPENPGDSGNSSSE 1255

  Fly  1638 DP----TDCTRFYLCLQQVPTILQSCSSGSFFDSNQGYCRPNDGSCQLAICNGLEDGKLVAHPED 1698
            .|    |.||         |...:..::.|:                            .|||..
  Fly  1256 SPPEGATPCT---------PNAPKKSTTSSY----------------------------TAHPTP 1283

  Fly  1699 CRSYYSCSSQNGTSLVQCDEGQY-FHSLLSICRVDHGQCRKVSNQDETETAPRLCYGLHGVKLPH 1762
              .|.:..::..||.::...|.. .|      :.|...|..:.|               |:.|..
  Fly  1284 --KYTTEGNKAETSTLKSPTGTTPGH------QEDRTDCSNMPN---------------GIFLRD 1325

  Fly  1763 ELYCNLYYACVKGLAIPVECPVQHQFNPVLSICE------------PESQAVQPCSNGQLDGNVS 1815
            ...||.||.|:.|.||...||....|:....:|.            ||:...:|       .:..
  Fly  1326 FQSCNKYYVCLNGKAIAGHCPRNLHFDIKRKVCNFPSLVDCPLDEAPENVTKKP-------SDTE 1383

  Fly  1816 YVYRCGNLQDGTFLANRTDCTRYFICAGGVATAQRCAAGTFFDSEQLLC-------------LAD 1867
            ....|.:|::|.::.:...|:|:::||.|.|..::|..|..||.:...|             .||
  Fly  1384 STPDCKSLRNGAYVRDPKSCSRFYVCANGRAIPRQCPQGLHFDIKSNFCNYPILVQCSLEESQAD 1448

  Fly  1868 DGSCPLVESVPDDDDNPNNQHVPPDPVVC-EGKHGYLMPDPANCNNFYLCVSGKLRHELCYTDNF 1931
            .....|.|.|||                | :.|......|....|.:|:|:.||.....|...|:
  Fly  1449 AHGALLAEGVPD----------------CTKVKEDTRFGDVKQHNKYYVCLKGKAVLHYCSPGNW 1497

  Fly  1932 FNATLQQCQPYEIA 1945
            |:...|:|....:|
  Fly  1498 FDLRSQKCIDQRLA 1511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884
CBM_14 153..206 CDD:279884
CBM_14 211..257 CDD:279884 15/51 (29%)
CBM_14 298..343 CDD:279884 10/49 (20%)
CBM_14 354..395 CDD:279884 9/40 (23%)
CBM_14 427..468 CDD:279884 8/58 (14%)
ChtBD2 488..535 CDD:214696 5/48 (10%)
CBM_14 544..593 CDD:279884 10/68 (15%)
CBM_14 <1320..1361 CDD:279884 6/42 (14%)
ChtBD2 1627..1675 CDD:214696 8/51 (16%)
CBM_14 1684..1733 CDD:279884 8/49 (16%)
ChtBD2 1752..1797 CDD:214696 14/56 (25%)
CBM_14 1820..1868 CDD:279884 15/60 (25%)
CBM_14 1896..1939 CDD:279884 12/43 (28%)
ChtBD2 2046..2091 CDD:214696
Muc68DNP_648504.2 ChtBD2 21..69 CDD:214696 14/52 (27%)
PHA03249 1088..>1209 CDD:223023 33/222 (15%)
CBM_14 1314..1366 CDD:279884 16/66 (24%)
CBM_14 1388..1440 CDD:279884 14/51 (27%)
ChtBD2 1459..1505 CDD:214696 14/61 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D33909at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.