DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and CG13312

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster


Alignment Length:426 Identity:97/426 - (22%)
Similarity:136/426 - (31%) Gaps:128/426 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 NGKCTMAGRSLCKLSLLAPLAEAT----NVCSTEVNGAYIANSGSCGEFYICDEQIAYPQKCDLG 130
            |..|...|..|. |.||..|..:|    |||:|       .|:.:|   |...:.    |.|.:.
  Fly     4 NRVCLPLGLPLL-LFLLGCLVSSTHGTCNVCNT-------VNNLTC---YSSTQM----QSCQVD 53

  Fly   131 SFFNETLAACIPDANSTCWQNLCINKTNGVFVENEANCGSYYVCSNGEATLQTCPQGSFFNTSVA 195
            .....|...| |..      .:|::.::||..:.|.:      .|:.:|..|.|.:..  .|...
  Fly    54 VLSTATPTDC-PSG------YVCVSGSSGVLCQPEDS------ASDSQADCQECNKCD--ETQTF 103

  Fly   196 ACTVDQGNSQCWVNYCIGQDDGSAVADK-SNCSLFYVCSNNTATAQECPEGSYFESNNWGCVPGT 259
            |||..|..:     .|:|.|   .|.|. ..|:..|||:.|.......|..        |.:| |
  Fly   104 ACTGTQSFA-----LCLGTD---TVQDSVGTCASGYVCNINDTQICGLPAD--------GVMP-T 151

  Fly   260 CTTESPCDDSTTTTTESCAEETTEPPASCDCGDIKNADFIPDEENCRKYFICIDGVLVAADCGKG 324
            |   |..|||||||..|....||..|.|                                     
  Fly   152 C---SYSDDSTTTTVSSTTSSTTAAPPS------------------------------------- 176

  Fly   325 NVFNANLSVCEVDADNTCCVADCTDGEAKVDPQ---DCTKYFKCQ--SGDW--TSVSCDSGSYFN 382
                       ..:.:|.|.|..:.|:..|...   .|.:|..|.  .|.|  .:.:|....||:
  Fly   177 -----------TSSASTYCAAVQSQGKYAVGYNAYTTCRQYIYCTLVDGSWIGQTYTCPGSMYFD 230

  Fly   383 ETLNCCQVDVNNVC---IDAKSNSTQIPTTSTVETSSVDKCNAKDPPA-------SGKNCWTYQH 437
            .....|...:.:.|   ....|.:|..||||..|.    .|.|.....       :...|..|..
  Fly   231 SASEMCVSTMPSTCSTTATTSSTTTAAPTTSNPEA----YCQAMQSAGYYPVGTDASTTCHQYID 291

  Fly   438 CI--SGQWEDG--TCPNNTYFDASVGICREDTENVC 469
            |.  .|.|...  |||.:.|::::...|.....:.|
  Fly   292 CFLNGGTWGGNMYTCPGSLYYNSASRTCVSTLPSTC 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884 10/50 (20%)
CBM_14 153..206 CDD:279884 13/52 (25%)
CBM_14 211..257 CDD:279884 12/46 (26%)
CBM_14 298..343 CDD:279884 1/44 (2%)
CBM_14 354..395 CDD:279884 10/47 (21%)
CBM_14 427..468 CDD:279884 10/51 (20%)
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:279884
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
CG13312NP_648260.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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