DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and Peritrophin-A

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_523418.1 Gene:Peritrophin-A / 33023 FlyBaseID:FBgn0022770 Length:230 Species:Drosophila melanogaster


Alignment Length:227 Identity:50/227 - (22%)
Similarity:78/227 - (34%) Gaps:67/227 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 NCGSYYVCSNGEATLQTCPQGSFFNTSVAACTVDQGNSQC---WVNYCIG-QDDGSAV------- 220
            ||..:::|:||..||:||..|..|:...|.      ::.|   |...|.| |.|.:.:       
  Fly    42 NCDQFFLCTNGTLTLETCENGLLFDGKGAV------HNHCNYNWAVDC
KGRQWDPTPISTPACEY 100

  Fly   221 -----ADKSNCSLFYV-CSNNTATAQECPEGSYFESNNWGCVPGTCTTESPCDDSTTTTTESCAE 279
                 |...:||..|: |::.....|:|..|..::....||            :......|.|..
  Fly   101 QFGLYAVSKDCSTTYIKCAHGEPHEQDCDAGLAYDERIHGC------------NWPDQLLEHCNP 153

  Fly   280 ETT---EPPASCDCGDIKNADF-----IPDEENCRKYFICIDGVLVAADCGKGNVFNANLSVCEV 336
            |..   :.|...|...:. |.|     .|...:|.:...|::|......||:..||:.:...|| 
  Fly   154 EAVVGFKCPTKVDPNSVA-ARFWPFPRFPVAGDCHRLITCVEGHPRLISCGEDKVFDEHTLTCE- 216

  Fly   337 DADNTCCVADCTDGEAKVDPQ----DCTKYFK 364
                              ||:    .|..|.|
  Fly   217 ------------------DPEYASGSCANYGK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884
CBM_14 153..206 CDD:279884 12/38 (32%)
CBM_14 211..257 CDD:279884 14/59 (24%)
CBM_14 298..343 CDD:279884 11/49 (22%)
CBM_14 354..395 CDD:279884 5/15 (33%)
CBM_14 427..468 CDD:279884
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:279884
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
Peritrophin-ANP_523418.1 CBM_14 36..83 CDD:279884 14/46 (30%)
CBM_14 103..147 CDD:279884 10/55 (18%)
ChtBD2 179..218 CDD:214696 10/57 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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