DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and obst-A

DIOPT Version :10

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_608378.2 Gene:obst-A / 33022 FlyBaseID:FBgn0031097 Length:237 Species:Drosophila melanogaster


Alignment Length:241 Identity:65/241 - (26%)
Similarity:97/241 - (40%) Gaps:43/241 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 LAACIPDANSTCWQNLCINKTNGVFVENEANCGSYYVCSNGEATLQTCPQGSFF---NTSVAACT 198
            :|..:..||..|      .|.||.|.: |..|..:|||.:|.|..:.||.|..|   |.....| 
  Fly    14 VATTVSAANFEC------PKPNGQFAD-EVQCDKFYVCDDGVAKAKLCPDGLVFDPLNRKFNKC- 70

  Fly   199 VDQG-NSQC----------WVNYCIGQDDGSAVADKSNCSLFYVCSNNTATAQECPEGSYFESNN 252
             ||. |..|          ...||..::...|..|.:.|::||.|....|...:|..|.:|:..:
  Fly    71 -DQPFNVDCEDRTELQEPKSSKYCPRKNGFFAHPDPAVCNIFYNCIEGDALETKCTVGLHFDEYS 134

  Fly   253 WGCV-PGTCTTESPC--DDSTTTTTESCAEETTEPPASCDCGDIKNADFIPDEENCRKYFICIDG 314
            ..|| |.|...|. |  :..|:.|...|.:   :.|.:.|.|.:......|...:|:|:::|::|
  Fly   135 GTCVWPDTAKREG-CNPEQRTSETGFVCPK---DQPKTDDRGQVVTHPKYPHPTDCQKFYVCLNG 195

  Fly   315 VLVAAD-----CGKGNVFNANLSVCEVDADNTCCVADCTDGEAKVD 355
                .|     |..|.|:|....:|:...:    |..|.|....||
  Fly   196 ----EDPRDLGCQLGEVYNDATEMCDAPEN----VPGCEDWYKDVD 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:426342 3/9 (33%)
CBM_14 153..206 CDD:426342 20/56 (36%)
CBM_14 211..257 CDD:426342 13/46 (28%)
CBM_14 294..343 CDD:426342 11/53 (21%)
CBM_14 354..395 CDD:426342 2/2 (100%)
CBM_14 427..468 CDD:426342
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:426342
CBM_14 <1320..1361 CDD:426342
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:426342
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:426342
CBM_14 1896..1939 CDD:426342
ChtBD2 2046..2091 CDD:214696
obst-ANP_608378.2 CBM_14 27..77 CDD:426342 20/52 (38%)
CBM_14 95..143 CDD:426342 13/47 (28%)
CBM_14 180..225 CDD:426342 12/52 (23%)
Blue background indicates that the domain is not in the aligned region.

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