DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and cpg-2

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:614 Identity:136/614 - (22%)
Similarity:208/614 - (33%) Gaps:193/614 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 RSLCKLSLLAPLAEATN-----VCSTEVNGAYIANSGSC-GEFYICDEQIAYPQKCDLGSFFNET 136
            :::..|:||| .|.|.|     .|:..::|.|..  |.| .:|..|...||....|.....:||.
 Worm     2 KTVAALTLLA-FATAANGQFLQDCTNALDGLYAL--GECEPQFLTCSGGIARIMDCPADLIYNEP 63

  Fly   137 LAACIPDANSTCWQNLCINKTNGVFVENEANC-GSYYVCSNGEATLQTCPQGSFFNTSVA----- 195
            |..|       .|::            |...| ||      ||::.:|..:||..::..|     
 Worm    64 LLIC-------DWRH------------NVIGCEGS------GESSGETSGEGSGESSGEASGEGS 103

  Fly   196 ------------------ACTVDQGNSQCWV-NYCIGQDDGSAVADKSNCSLFY-VCSNNTATAQ 240
                              |.....|:.:..| |.|...:||:  .....|:.:| .|:.|||...
 Worm   104 GEASGEGSGEASGEGSGEASGEGSGSGEETVENVCENLEDGA--YSSGGCTTYYFFCTTNTARFL 166

  Fly   241 ECPEGSYFESNNWGCVPGTCTTESPCDDSTTTTT------------------------------- 274
            .||...::::::..|:..:...|  |.:..|.|.                               
 Worm   167 SCPTPLFYDADSQKCIWKSLVEE--CKEDLTITDGSGETSGEGSGEASGEASGEGSGEASGESSG 229

  Fly   275 ----ESCAEETTEPPASCDCGDIKNADFIPDEENCRKYFI-CIDGVLVAADCGKGNVFNANLSVC 334
                |:..|.:.|...:|:    ..||.|.....|...|: |..|:....||....|||..:.||
 Worm   230 QGSGEASGEGSGELEPTCE----GKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVC 290

  Fly   335 EVDADNTCCVADCT-----------DGEAKVDPQDCTKYF-KCQSGDWTSVSCDSGSYFNE-TLN 386
            :...|    ||:|.           ||.....  .|:..| .|.:|....:.|.:|..|:| |:.
 Worm   291 DWPRD----VAECAGLPTPQPTCEEDGYFSFG--QCSSSFTACTNGRAIVMFCPAGLKFSESTVR 349

  Fly   387 CCQVDVNNVCIDAKSNSTQIPTTSTVETSSVDKCNAKDPPASGKNCWTYQHCISGQWEDGTCPNN 451
            |          |.:||.::...||..|:..          |||:.        ||:...      
 Worm   350 C----------DYESNVSECQETSGEESGE----------ASGEQ--------SGEGSG------ 380

  Fly   452 TYFDASVGICREDTENVCPENRSSGSRQKRSVEDCTCEGGIAQGTIIGHSTDCD-KYLICENGQL 515
                       |.:.....|:...||    .||:.....|:..|.   |:..|. :.|.|:||.:
 Worm   381 -----------EASGEASGESSGEGS----GVEEQNQCVGLDNGL---HAIGCSPRVLSCQNGHV 427

  Fly   516 VEGVCGVGNVFQKSSGIC-VPDTKATCWVCSNKPNGYQMADPT-----DCTSYLTCWNGL--ATK 572
            ....|....||...|.|| .|.|...|.:     ....:.|.|     ||::.....:||  ||.
 Worm   428 DIFECPSSLVFNDQSLICDYPQTSLKCLI-----EDTILIDETPIAAFDCSTDGLFSDGLCSATY 487

  Fly   573 HTCGSGEWYN---GDGNCVID-VNAKCIN 597
            |.|.:|:..|   ...|.|.. .|.:|::
 Worm   488 HQCTAGQLINFTCAASNAVFSAANTECVD 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884 14/51 (27%)
CBM_14 153..206 CDD:279884 12/76 (16%)
CBM_14 211..257 CDD:279884 12/46 (26%)
CBM_14 298..343 CDD:279884 13/45 (29%)
CBM_14 354..395 CDD:279884 10/42 (24%)
CBM_14 427..468 CDD:279884 6/40 (15%)
ChtBD2 488..535 CDD:214696 14/48 (29%)
CBM_14 544..593 CDD:279884 14/59 (24%)
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
cpg-2NP_498551.3 CBM_14 24..76 CDD:279884 16/72 (22%)
CBM_14 138..190 CDD:279884 13/55 (24%)
ChtBD2 245..293 CDD:214696 15/51 (29%)
CBM_14 311..359 CDD:279884 15/59 (25%)
CBM_14 403..454 CDD:279884 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7642
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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