DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and cpg-1

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:724 Identity:140/724 - (19%)
Similarity:214/724 - (29%) Gaps:260/724 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 SGAYIQSCPTGLFYDATDQVCTFSGNCDPQVCNDQSEYFVSPDYEDPNSFCLCRAGEPITVSCPI 797
            :.||.|....|::.:...:..|..|:.|....:              |.|........|...|  
 Worm    13 ASAYAQYGVAGMYENLPLETTTLDGSGDGSGAD--------------NGFVSGADAVAIDTDC-- 61

  Fly   798 GYTFNTEELECVLIPLPDPRCCANGCSGKTDFSTFPTIEGTDGFCLCVDDVPKYISCPENSQYDL 862
                :|:|         |......|||.:              |..|...:.:.:.||.:..||.
 Worm    62 ----STKE---------DGLYAIGGCSPQ--------------FLTCSGGISRIMDCPADLIYDP 99

  Fly   863 ELGAC----------------TATE-----EETT----CPVNACTVGICESAL------------ 890
            .:.||                |:|:     ||||    .||...|....|...            
 Worm   100 RIVACEYSYNVPQCGGVPQDVTSTQEAYPSEETTVNPYAPVEEATTTPAEDVTVPEETTTEAYAP 164

  Fly   891 --DFNT--------FPVSSDPSGFCYCLDSCPIYETCLDDLVYNEDLKRCTEPEDPSVVSRCDAE 945
              |::|        .||.:..|.:      .||       :.|........||...|.|::....
 Worm   165 VDDYSTTTPAEDVPVPVETTASPY------API-------VPYTTGAPAADEPVTRSAVTKSCVG 216

  Fly   946 KCDSIPDFTPYPSINGTDGFCYCNGGLPVFRECEENQEFDPAVGFCRTVVDSCVTALCDANQCAT 1010
            |.|....|.     ..:|.:..|:.|..:..:|.....||.|...|..|::              
 Worm   217 KADGFYSFG-----ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMN-------------- 262

  Fly  1011 LDNYVPFPTNTASDDDGAFCYCKDGEVILEQCSPEMVFSADLGRCTVQAAPECVCAPGKCGSSDG 1075
                ||..||.:.:|:|                     |||      :..||   :.|:...|:|
 Worm   263 ----VPECTNGSGNDEG---------------------SAD------ETTPE---SSGEMPYSNG 293

  Fly  1076 YTTYEALNTNEGFCLCVSGTPVFTECLNGETYNSILGACFSS---TAKIIASGLCDDRRCHSRAV 1137
            | .||...|            |..:..:.:.|...:.|.:.:   :.|..|..:......:...|
 Worm   294 Y-GYEETTT------------VAEDVPSTKDYAEPIAAAYVARYPSEKTTAENVPTTTIGYEPEV 345

  Fly  1138 VDATFAAV---NTTSGY------CSCQDVGVSTFINCADEHV-----YEESAGTCVVAACDYTSC 1188
            |:.|...|   .||.||      .:.:....:|.:....|.|     |.|...|    |.|..| 
 Worm   346 VETTAPYVEETTTTVGYKPEVEETTTEAEVPTTTVGYEPEIVETTAPYVEETTT----AADVPS- 405

  Fly  1189 LNRVAFEPFEAKNTTEGFCSC------------DGVPYFHQCQT-GHVFDKAQGICLLKDTMAMI 1240
             ....:||...:.|||.....            ..|||..:..| ..|.....|           
 Worm   406 -TTAVYEPEVVETTTEAEVPTTTTVGYEPEVVETTVPYVEETTTAADVPTTTVG----------- 458

  Fly  1241 SCNLRECLKRSQFEPFAAENTNSGFCSCDDLQRVSVTYHPCGEGEI--------------FAP-E 1290
                        :||...|.|...     ::...:|.|    |.|:              :|| .
 Worm   459 ------------YEPEVEETTTEA-----EVPTTTVGY----ESEVVETTAADIPTTTIGYAPIV 502

  Fly  1291 FGMCTSHSIQKRSVEAEEN----ICISNEMRSVPANCSQ-YEMCIDGRWRRRTCSDQRYYNPEQQ 1350
            ....|:..:...:|.||..    .|:.......|  ||| |:.|::|:.....|.:..:::|||.
 Worm   503 VESTTAADVPTTTVPAETTTEVPACVEGATAIEP--CSQHYKNCVNGQEAIFICENGLFFSPEQA 565

  Fly  1351 RCLEPRDDL 1359
            || .|.|.:
 Worm   566 RC-APADQI 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884
CBM_14 153..206 CDD:279884
CBM_14 211..257 CDD:279884
CBM_14 298..343 CDD:279884
CBM_14 354..395 CDD:279884
CBM_14 427..468 CDD:279884
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:279884
CBM_14 <1320..1361 CDD:279884 15/41 (37%)
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
cpg-1NP_001021159.1 CBM_14 61..113 CDD:279884 15/80 (19%)
CBM_14 214..266 CDD:279884 14/74 (19%)
CBM_14 <537..576 CDD:279884 14/38 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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