DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and cpg-1

DIOPT Version :10

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:724 Identity:140/724 - (19%)
Similarity:214/724 - (29%) Gaps:260/724 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 SGAYIQSCPTGLFYDATDQVCTFSGNCDPQVCNDQSEYFVSPDYEDPNSFCLCRAGEPITVSCPI 797
            :.||.|....|::.:...:..|..|:.|....:              |.|........|...|  
 Worm    13 ASAYAQYGVAGMYENLPLETTTLDGSGDGSGAD--------------NGFVSGADAVAIDTDC-- 61

  Fly   798 GYTFNTEELECVLIPLPDPRCCANGCSGKTDFSTFPTIEGTDGFCLCVDDVPKYISCPENSQYDL 862
                :|:|         |......|||.:              |..|...:.:.:.||.:..||.
 Worm    62 ----STKE---------DGLYAIGGCSPQ--------------FLTCSGGISRIMDCPADLIYDP 99

  Fly   863 ELGAC----------------TATE-----EETT----CPVNACTVGICESAL------------ 890
            .:.||                |:|:     ||||    .||...|....|...            
 Worm   100 RIVACEYSYNVPQCGGVPQDVTSTQEAYPSEETTVNPYAPVEEATTTPAEDVTVPEETTTEAYAP 164

  Fly   891 --DFNT--------FPVSSDPSGFCYCLDSCPIYETCLDDLVYNEDLKRCTEPEDPSVVSRCDAE 945
              |::|        .||.:..|.:      .||       :.|........||...|.|::....
 Worm   165 VDDYSTTTPAEDVPVPVETTASPY------API-------VPYTTGAPAADEPVTRSAVTKSCVG 216

  Fly   946 KCDSIPDFTPYPSINGTDGFCYCNGGLPVFRECEENQEFDPAVGFCRTVVDSCVTALCDANQCAT 1010
            |.|....|.     ..:|.:..|:.|..:..:|.....||.|...|..|::              
 Worm   217 KADGFYSFG-----ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMN-------------- 262

  Fly  1011 LDNYVPFPTNTASDDDGAFCYCKDGEVILEQCSPEMVFSADLGRCTVQAAPECVCAPGKCGSSDG 1075
                ||..||.:.:|:|                     |||      :..||   :.|:...|:|
 Worm   263 ----VPECTNGSGNDEG---------------------SAD------ETTPE---SSGEMPYSNG 293

  Fly  1076 YTTYEALNTNEGFCLCVSGTPVFTECLNGETYNSILGACFSS---TAKIIASGLCDDRRCHSRAV 1137
            | .||...|            |..:..:.:.|...:.|.:.:   :.|..|..:......:...|
 Worm   294 Y-GYEETTT------------VAEDVPSTKDYAEPIAAAYVARYPSEKTTAENVPTTTIGYEPEV 345

  Fly  1138 VDATFAAV---NTTSGY------CSCQDVGVSTFINCADEHV-----YEESAGTCVVAACDYTSC 1188
            |:.|...|   .||.||      .:.:....:|.:....|.|     |.|...|    |.|..| 
 Worm   346 VETTAPYVEETTTTVGYKPEVEETTTEAEVPTTTVGYEPEIVETTAPYVEETTT----AADVPS- 405

  Fly  1189 LNRVAFEPFEAKNTTEGFCSC------------DGVPYFHQCQT-GHVFDKAQGICLLKDTMAMI 1240
             ....:||...:.|||.....            ..|||..:..| ..|.....|           
 Worm   406 -TTAVYEPEVVETTTEAEVPTTTTVGYEPEVVETTVPYVEETTTAADVPTTTVG----------- 458

  Fly  1241 SCNLRECLKRSQFEPFAAENTNSGFCSCDDLQRVSVTYHPCGEGEI--------------FAP-E 1290
                        :||...|.|...     ::...:|.|    |.|:              :|| .
 Worm   459 ------------YEPEVEETTTEA-----EVPTTTVGY----ESEVVETTAADIPTTTIGYAPIV 502

  Fly  1291 FGMCTSHSIQKRSVEAEEN----ICISNEMRSVPANCSQ-YEMCIDGRWRRRTCSDQRYYNPEQQ 1350
            ....|:..:...:|.||..    .|:.......|  ||| |:.|::|:.....|.:..:::|||.
 Worm   503 VESTTAADVPTTTVPAETTTEVPACVEGATAIEP--CSQHYKNCVNGQEAIFICENGLFFSPEQA 565

  Fly  1351 RCLEPRDDL 1359
            || .|.|.:
 Worm   566 RC-APADQI 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:426342
CBM_14 153..206 CDD:426342
CBM_14 211..257 CDD:426342
CBM_14 294..343 CDD:426342
CBM_14 354..395 CDD:426342
CBM_14 427..468 CDD:426342
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:426342
CBM_14 <1320..1361 CDD:426342 15/41 (37%)
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:426342
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:426342
CBM_14 1896..1939 CDD:426342
ChtBD2 2046..2091 CDD:214696
cpg-1NP_001021159.1 CBM_14 61..113 CDD:426342 15/80 (19%)
rne <116..206 CDD:236766 20/102 (20%)
CBM_14 214..266 CDD:426342 14/74 (19%)
rne <321..499 CDD:236766 38/215 (18%)
CBM_14 <539..576 CDD:426342 12/36 (33%)
Blue background indicates that the domain is not in the aligned region.

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