DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and CG43218

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:NP_001246864.1 Gene:CG43218 / 12798438 FlyBaseID:FBgn0262854 Length:182 Species:Drosophila melanogaster


Alignment Length:147 Identity:42/147 - (28%)
Similarity:59/147 - (40%) Gaps:11/147 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 CIGQDDGSAVADKSNCSLFYVCSNNTATAQECPEGSYFESNNWGCV-------PGTCTTESPCDD 268
            |.|......|.|..:||.:|:|.:.:....:||:|..|:.....||       .|||:..|....
  Fly    34 CSGHLVNDLVPDCEDCSGYYICGDGSYEKVKCPQGLIFDIALNTCVLGQCPRFDGTCSANSTVPP 98

  Fly   269 STTTTTESCAEETTEPPASCDCGDIKNADF----IPDEENCRKYFICIDGVLVAADCGKGNVFNA 329
            ..||||.:.|.||..|..|..|.:......    ||...:||.::.|.....|...|..|..|:.
  Fly    99 PVTTTTTTAAPETIPPTPSGPCDNDVTCQLQEKSIPHPTHCRNFYTCYGKCAVLGLCELGKWFDR 163

  Fly   330 NLSVCEVDADNTCCVAD 346
            ..:||......|.|.|:
  Fly   164 EGNVCNYSHKVTNCPAN 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884
CBM_14 153..206 CDD:279884
CBM_14 211..257 CDD:279884 14/52 (27%)
CBM_14 298..343 CDD:279884 12/48 (25%)
CBM_14 354..395 CDD:279884
CBM_14 427..468 CDD:279884
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:279884
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
CG43218NP_001246864.1 CBM_14 34..79 CDD:279884 12/44 (27%)
CBM_14 133..177 CDD:279884 12/43 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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