DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and LOC110437948

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:XP_021322240.1 Gene:LOC110437948 / 110437948 -ID:- Length:195 Species:Danio rerio


Alignment Length:177 Identity:43/177 - (24%)
Similarity:62/177 - (35%) Gaps:45/177 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 CGEFYICDEQIAYPQKCDLGSFFNETLAACIPDANSTCWQNLCINKTNGVFVENEAN--CGSYYV 173
            |.|.:.|......|..|..|:|      ..:|.| |.||  .|   |.|.:..:...  |.:.:.
Zfish    34 CPEGHYCPPGATRPVPCHSGTF------VTVPQA-SQCW--AC---TAGWYCADGGRLLCPAGFY 86

  Fly   174 CSNGEA-TLQTCPQGSFFN----TSVAACTVDQGNSQCWVNYCIGQDDGSAVADKSNCSLFYVC- 232
            |..|.. .::.||.|::..    .|::.|....|.     :||..|:..|..   ..||..|.| 
Zfish    87 CPEGTGYDIRPCPAGTYSPDSGLISLSECRACDGG-----HYCSLQNSSSVT---GQCSEGYYCA 143

  Fly   233 ---------SNNTATAQECPEGSYFESNNWGCVPGTCTTESPCDDST 270
                     :.||.....||.|.:       |..||...: ||.:.|
Zfish   144 QGNISPQPYTQNTGVGGLCPVGHF-------CPQGTAQPQ-PCPEGT 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884 9/35 (26%)
CBM_14 153..206 CDD:279884 12/59 (20%)
CBM_14 211..257 CDD:279884 13/55 (24%)
CBM_14 298..343 CDD:279884
CBM_14 354..395 CDD:279884
CBM_14 427..468 CDD:279884
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:279884
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
LOC110437948XP_021322240.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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