DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43896 and Gm30500

DIOPT Version :9

Sequence 1:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster
Sequence 2:XP_017171830.1 Gene:Gm30500 / 102632425 MGIID:5589659 Length:614 Species:Mus musculus


Alignment Length:657 Identity:153/657 - (23%)
Similarity:203/657 - (30%) Gaps:242/657 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 NGQLV---------EGVCGVGNVFQKSSGICVPDTKATCWVCSNKPN----GYQMADPTDCTSYL 563
            |||.:         |.| .|..|.|.:|.:..|..    |....:|.    |:.:...|.|....
Mouse    42 NGQRLQLPALPRRRESV-SVTPVAQATSALLKPGV----WRRGAEPAQPGVGFHVTAETACPVGH 101

  Fly   564 TCWNGLATKHTCGSGEWYNGDGNCVIDVNAKCINPCSCGNGNVAH-------PICTNYFQCTDGV 621
            .|..||.....|..|.:   .....:.::::|: ||..|:...|.       |....|| |..||
Mouse   102 FCPVGLGMALPCPVGTF---SDRMFLSMSSECL-PCPPGHFCAASGLSAPSGPCAPGYF-CLSGV 161

  Fly   622 ---------------PQVKQCVVGE---------AFDSATGQCSTTVECSA-----KNCATASDG 657
                           ||...|..|.         ::.|..||.| ...|.|     :|..:.|. 
Mouse   162 SSPTPTGRSGHGGPCPQGHFCPRGTSLPQPCRAGSYGSLLGQVS-CFPCPAGYYCPENITSYSG- 224

  Fly   658 TTYPV-AGETGQFYVCLSNEATIQ-PCPVNTGY------SAALGIC-------------LDQPSP 701
              ||. ||    ||.....:...| |||  .||      :.:|..|             |.:||.
Mouse   225 --YPCPAG----FYCPRGTKHAAQFPCP--RGYYNPDPLTHSLDSCLPCPPGHYCGQENLTKPSG 281

  Fly   702 DCDQ-TICNSAAVDSTYPSNDNDSSTFCLCRDSGAYIQSCPTGLFYDATDQVCTFSGNCDPQVCN 765
            .||. ..|.|||.::.....||.:||.||| .:.|....||.|.:       |. .|:.:|..|.
Mouse   282 PCDAGWYCVSAAWNARPFDLDNYTSTNCLC-PATATGGKCPAGSY-------CP-EGSPEPIPCT 337

  Fly   766 DQSEYFVSPDYEDPNSFCLCRAGEPI-TVSCPIGYTFNTEELECVLIPLPDPRCCANGCSGKTDF 829
                         |.||| ..:|.|. |..|..||.                      |.|.:: 
Mouse   338 -------------PGSFC-ATSGLPTPTGPCQAGYF----------------------CIGGSE- 365

  Fly   830 STFPTIEGTDGFCLCVDDVPKYISCPENSQYDLELGACTATEEETTCPVNACTVGICESALDFNT 894
            |..|..|.|.|.|      |....||            .|:.:.|.|||..           |::
Mouse   366 SPAPVDEVTGGPC------PPGSYCP------------VASHKPTPCPVGT-----------FSS 401

  Fly   895 FP-------VSSDPSGFCYCLDS--------CPIYETCLDDLVYNEDLKRCTEPEDPSVVSRCDA 944
            .|       ..|.|||| ||.::        ||.                              .
Mouse   402 LPEQTTSSTCRSCPSGF-YCKEAGLQAPSGWCPA------------------------------G 435

  Fly   945 EKCDS----IPDFTPYPSINGTDGFCYCNGGL--PVFRECEENQEFDPAVGFCRTVVDSCVTALC 1003
            ..|||    :.||:.||...|    .||..|.  .::..|... .:.|..|.  |.:..|  .||
Mouse   436 YYCDSSTGPVQDFSLYPCPRG----YYCPVGTTKAMYHSCPVG-TYGPRKGL--TSITEC--QLC 491

  Fly  1004 DANQCATLDNYVPFPTNTASDDDGAFCYCKDGEVILEQCS--PEMVFSA-----DLGRCTVQ--- 1058
            .|.:..:|.. :..||.......|.....|..|...::.|  .|.|...     ||...|.|   
Mouse   492 PAGKFCSLAG-ISAPTGKVQTALGLNMVSKGLEAYPDRTSSLQESVLQGTGAKQDLPASTPQMGL 555

  Fly  1059 ---AAPE 1062
               |||:
Mouse   556 GASAAPQ 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884
CBM_14 153..206 CDD:279884
CBM_14 211..257 CDD:279884
CBM_14 298..343 CDD:279884
CBM_14 354..395 CDD:279884
CBM_14 427..468 CDD:279884
ChtBD2 488..535 CDD:214696 9/31 (29%)
CBM_14 544..593 CDD:279884 9/52 (17%)
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
Gm30500XP_017171830.1 TNFRSF 394..518 CDD:389949 37/175 (21%)
CRD1 394..411 CDD:276900 5/27 (19%)
CRD2 414..451 CDD:276900 13/67 (19%)
CRD3 453..506 CDD:276900 13/62 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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