DRSC/TRiP Functional Genomics Resources

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Protein Alignment slc25a1a and sea

DIOPT Version :9

Sequence 1:NP_956901.1 Gene:slc25a1a / 393579 ZFINID:ZDB-GENE-040426-1172 Length:359 Species:Danio rerio
Sequence 2:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster


Alignment Length:296 Identity:191/296 - (64%)
Similarity:226/296 - (76%) Gaps:3/296 - (1%)


- Green bases have known domain annotations that are detailed below.


Zfish    61 AAAAIGGRKITHPWKAIFAGGIAGGIEICITFPTEYVKTQLQLDERANPPRYRGIGDCVKLTVQY 125
            ||||..|:.   ..|.|.||||.||||||||:|||||||||||||:....:|.||.||||.||..
  Fly    24 AAAADSGQV---GLKGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGE 85

Zfish   126 HGLRGLYRGLSSLLYGSIPKSAVRFGTFEVLSNPMRDATGRLDNKASLLCGLGAGIAEAVLVVCP 190
            .|..|||||||.|:||||||||.|||.||.|.:...|:.|:|.|...||||||||:.||::.|.|
  Fly    86 RGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTP 150

Zfish   191 METVKVKFIHDQCSLRPRYRGFFHGVREIIRDQGVRGTYQGLTATLLKQGSNQAIRFYVMNLLRN 255
            |||:|||||:||.|..|::|||.|||.:||:.:|:.|.|:|||.|:|||||||||||:|:..|::
  Fly   151 METIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKD 215

Zfish   256 WYKGDDPARDMHPLVTAMFGATAGAASVFGNTPLDVVKTRMQGLEAHRYKSTMDCAFQILKNEGP 320
            .|||||..:.:..||..:|||.||||||||||||||||||||||||.:||:|..||.:|||||||
  Fly   216 LYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEGP 280

Zfish   321 LAFYKGTVPRLGRVCLDVAIVFVLYEEVVKLLNNVW 356
            .|||||||||||||||||||.|::|:..:.|.|.||
  Fly   281 AAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNKVW 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slc25a1aNP_956901.1 Solcar 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 71..159 59/87 (68%)
Mito_carr 72..156 CDD:365909 58/83 (70%)
Solcar 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 170..256 52/85 (61%)
Mito_carr 171..259 CDD:365909 53/87 (61%)
Mito_carr 266..354 CDD:365909 63/87 (72%)
Solcar 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 266..351 62/84 (74%)
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 180/267 (67%)
Mito_carr 34..117 CDD:278578 58/82 (71%)
Mito_carr 125..220 CDD:278578 57/94 (61%)
Mito_carr 235..314 CDD:278578 60/78 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 135 1.000 Domainoid score I4920
eggNOG 1 0.900 - - E1_KOG0756
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4362
Inparanoid 1 1.050 401 1.000 Inparanoid score I1885
OMA 1 1.010 - - QHG58666
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002928
OrthoInspector 1 1.000 - - otm25840
orthoMCL 1 0.900 - - OOG6_104005
Panther 1 1.100 - - O PTHR45788
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3276
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.830

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