DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11570 and obst-F

DIOPT Version :9

Sequence 1:NP_001356902.1 Gene:CG11570 / 39357 FlyBaseID:FBgn0036230 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster


Alignment Length:228 Identity:48/228 - (21%)
Similarity:71/228 - (31%) Gaps:65/228 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DPNH-------NVMLPYPNDCSKYYVCQKGRAYEQQCPLNLFWSQMTYRCDYKEYSNC--NTYIP 98
            ||.|       ...||:|.:|..|::|..|..:..||.....|:.....|...:.:.|  .:.|.
  Fly   143 DPEHIECRHYGAYFLPHPRNCGLYFICAYGHLHRHQCGRGTAWNFEKSECQLSDQAICYGESQIS 207

  Fly    99 SPNHDVEVIFSAYPGDCRRFYETRILRCEQNLQWSSVYQRCVVPQYGDCQNSPVTVPPVV---PF 160
            .|:.|||....                               ||...  ....|||..:|   .:
  Fly   208 EPHTDVETTMK-------------------------------VPTAN--SEGAVTVCYIVGSSEY 239

  Fly   161 TPLPTYPPVPTVPATVIPYDPMPTAGTPPPITPMESLPLP--IDVQSLCNNSPPNAYIPYPGSCK 223
            |.|..:...|.:...             ||:||    |.|  .:..:|...|...:|:.:|..|.
  Fly   240 TTLQQFLTSPEITEL-------------PPVTP----PSPPRAEANALTCPSTKQSYMSHPEDCS 287

  Fly   224 KFIHC-GPTATILSCAGSSNWNPAQHACTTYSN 255
            |:..| |....:.||.....|:.....|....|
  Fly   288 KYYICIGGMPVLTSCPKGLFWDQKSGFCEMEKN 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11570NP_001356902.1 CBM_14 51..93 CDD:307643 10/41 (24%)
obst-FNP_649186.1 CBM_14 43..94 CDD:279884
CBM_14 156..198 CDD:279884 11/41 (27%)
CBM_14 272..321 CDD:279884 12/49 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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