DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG7248 and Gasp

DIOPT Version :9

Sequence 1:	NP_648530.1	Gene:	CG7248 / 39356	FlyBaseID:	FBgn0036229	Length:	796	Species:	Drosophila melanogaster
Sequence 2:	NP_649611.2	Gene:	Gasp / 40745	FlyBaseID:	FBgn0026077	Length:	258	Species:	Drosophila melanogaster

Alignment Length:	305	Identity:	67/305 - (21%)
Similarity:	106/305 - (34%)	Gaps:	108/305 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly    57 QNSTYCESLSNGFYEYPYNCSAYITCYDSCADLEYCPDGKLFNSP-----LQICDTPGAVDC--- 113
            |:|..|.. ..|||.:..:|..|..|.:..::|:.|.:|..|::.     .:.||....|||
  Fly    18 QSSFKCPD-DFGFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDCGDR 81

  Fly   114 ---EPLPYPTPSPTESPPENPCLGTRNNTLLPSAENCNEFYLCVNDQSKVYRCPGEMLFNPDLNI 175
               || |..||.         |  :|...:.|....|:.|:.|.|.:...|:|...:.::.|..:
  Fly    82 TELEP-PITTPH---------C--SRLYGIFPDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARV 134

  Fly   176 CDDKDNVWCYGDRTTPDPLDTTTPAEESFTKCEDQE---------------KGTF--FPDPENCQ 223
            |     :|.                 :...:|:::|               .|:|  ...||:|:
  Fly   135 C-----MWA-----------------DQVPECKNEEVANGFSCPAAGELANAGSFSRHAHPEDCR 177

  Fly   224 QYYYCWGN--KSYTILPCPVDNWF----NPISGNC-GPDIAPDACRETTPTSTPTIDTSSSTTVA 281
            :||.|...  :.|   .||:...|    :..:||| .|:..| .|
  Fly   178 KYYICLEGVAREY---GCPIGTVFKIGDSDGTGNCEDPEDVP-GC-------------------- 218

  Fly   282 PTSTEDSVGNPCADQELGASFPIKSDCQSYLLCLNNGESTTAKCP 326
                ||..|:          ..:||..:|.||...|.|..|...|
  Fly   219 ----EDYYGD----------LDLKSIRKSELLAGLNSEGRTKGAP 249

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG7248	NP_648530.1	CBM_14	62..113	CDD:279884	14/55 (25%)
		CBM_14	136..182	CDD:279884	10/45 (22%)
		CBM_14	207..261	CDD:279884	19/77 (25%)
		CBM_14	293..347	CDD:279884	9/34 (26%)
		CBM_14	367..421	CDD:279884
		CBM_14	470..522	CDD:279884
		CBM_14	544..597	CDD:279884
		CBM_14	630..678	CDD:279884
		CBM_14	710..758	CDD:279884
Gasp	NP_649611.2	ChtBD2	21..72	CDD:214696	12/51 (24%)
		CBM_14	97..144	CDD:366726	10/68 (15%)
		CBM_14	170..218	CDD:366726	15/51 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45443981
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23301
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940