DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7248 and CG13312

DIOPT Version :9

Sequence 1:NP_648530.1 Gene:CG7248 / 39356 FlyBaseID:FBgn0036229 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster


Alignment Length:460 Identity:104/460 - (22%)
Similarity:152/460 - (33%) Gaps:158/460 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KVCLV--FPFILWLWGTPGVDVLSIKGPSSVGWNNVNQNVILSFSKRNSHECVVSSQQNS-TYCE 63
            :|||.  .|.:|:|.|                                   |:|||...: ..|.
  Fly     5 RVCLPLGLPLLLFLLG-----------------------------------CLVSSTHGTCNVCN 34

  Fly    64 SLSNGFYEYPYNCSAYITCYDSCADLEYCPDGKLFNSPLQICDTPGAVDCEPLPYPTPSPTESPP 128
            :::|            :|||.|              :.:|.|.    ||.    ..|.:||:.|.
  Fly    35 TVNN------------LTCYSS--------------TQMQSCQ----VDV----LSTATPTDCPS 65

  Fly   129 ENPCLGTRNNTLL-------PSAENCNEFYLCVNDQSKVYRCPGEMLFNPDLNICDDKDNVWCYG 186
            ...|:...:..|.       .|..:|.|...|  |:::.:.|.|...|            ..|.|
  Fly    66 GYVCVSGSSGVLCQPEDSASDSQADCQECNKC--DETQTFACTGTQSF------------ALCLG 116

  Fly   187 DRTTPDPLDTTTPAEESFTKCEDQEKGTFFPDPENCQQYYYCWGNKSYTILPCPVDNWFNPISGN 251
            ..|..|.:.|                         |...|.|..|.: .|...|.|.        
  Fly   117 TDTVQDSVGT-------------------------CASGYVCNINDT-QICGLPADG-------- 147

  Fly   252 CGPDIAPDACRETTPTSTPTIDTSSSTTVAPTSTEDSVGNPCADQELGASFPI----KSDCQSYL 312
                :.|........|:|....|:||||.||.|| .|....||..:....:.:    .:.|:.|:
  Fly   148 ----VMPTCSYSDDSTTTTVSSTTSSTTAAPPST-SSASTYCAAVQSQGKYAVGYNAYTTCRQYI 207

  Fly   313 LC-LNNGE--STTAKCPSNAWFDPKTGDCGPNVSPTAC---LESFETTTTAVTTQAPKDPCADQE 371
            .| |.:|.  ..|..||.:.:||..:..| .:..|:.|   ..:..|||.|.||..|:..|...:
  Fly   208 YCTLVDGSWIGQTYTCPGSMYFDSASEMC-VSTMPSTCSTTATTSSTTTAAPTTSNPEAYCQAMQ 271

  Fly   372 LGTSYPL----VTNCQQYILCMGNGESTVAN---CIYNSWFDPQTGNCGPDVS--PTACKESGVT 427
            ....||:    .|.|.|||.|..||.:...|   |..:.:::..:..|   ||  |:.|   ..|
  Fly   272 SAGYYPVGTDASTTCHQYIDCFLNGGTWGGNMYTCPGSLYYNSASRTC---VSTLPSTC---STT 330

  Fly   428 TASPT 432
            .||.|
  Fly   331 VASLT 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7248NP_648530.1 CBM_14 62..113 CDD:279884 9/50 (18%)
CBM_14 136..182 CDD:279884 9/52 (17%)
CBM_14 207..261 CDD:279884 8/53 (15%)
CBM_14 293..347 CDD:279884 14/60 (23%)
CBM_14 367..421 CDD:279884 17/62 (27%)
CBM_14 470..522 CDD:279884
CBM_14 544..597 CDD:279884
CBM_14 630..678 CDD:279884
CBM_14 710..758 CDD:279884
CG13312NP_648260.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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