DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG7248 and LOC108179232

DIOPT Version :9

Sequence 1:	NP_648530.1	Gene:	CG7248 / 39356	FlyBaseID:	FBgn0036229	Length:	796	Species:	Drosophila melanogaster
Sequence 2:	XP_021322084.1	Gene:	LOC108179232 / 108179232	-ID:	-	Length:	185	Species:	Danio rerio

Alignment Length:	180	Identity:	44/180 - (24%)
Similarity:	62/180 - (34%)	Gaps:	49/180 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   118 YPTPSPTESPPENPC-LGTRNNTLLPSAENCNEFYLCVNDQSKVYRCPGEMLFNPDLNICDDKDN 181
            |..|:.|..|.|.|| .||.:|.|  .:::.:..:||    ...:.|....|..|..|..   ..
Zfish     3 YYCPAGTRHPHEFPCPPGTWSNAL--GSKSVSSCWLC----PAGFYCNSSGLIQPSGNCA---PG 58

  Fly   182 VWCYGDRTT--PD--------------------PL---DTTTPAEESFTKCEDQEKGTFFPDPEN 221
            .:|.|...|  ||                    ||   |.|........:|.|...|....:.|:
Zfish    59 FYCAGGAKTAMPDDGLTGNRCPTRYYCPQGCASPLHCPDGTHSNSTGSAECSDCPTGWLCLEGED 123

  Fly   222 ---CQQYYYCWGNKSYTILPCPVDNWFNPISG----------NCGPDIAP 258
               |.:.:||.|.....||||| ...::|.:|          :.|...||
Zfish   124 LQLCPKGHYCVGGTVEDILPCP-PGTYSPKAGQSQVEQCLLCSAGESSAP 172

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG7248	NP_648530.1	CBM_14	62..113	CDD:279884
		CBM_14	136..182	CDD:279884	8/45 (18%)
		CBM_14	207..261	CDD:279884	18/65 (28%)
		CBM_14	293..347	CDD:279884
		CBM_14	367..421	CDD:279884
		CBM_14	470..522	CDD:279884
		CBM_14	544..597	CDD:279884
		CBM_14	630..678	CDD:279884
		CBM_14	710..758	CDD:279884
LOC108179232	XP_021322084.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D487374at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010