DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-G and CG13806

DIOPT Version :10

Sequence 1:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_647708.1 Gene:CG13806 / 38292 FlyBaseID:FBgn0035325 Length:297 Species:Drosophila melanogaster


Alignment Length:299 Identity:64/299 - (21%)
Similarity:90/299 - (30%) Gaps:117/299 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KTSLCEGK--------------------NGGLLPMFGSC---KGYYVCADGNAVTGTCEKNTLFN 69
            :|:.|||:                    ||.:.....||   .||| |   ||..|:|...|  .
  Fly    33 ETNSCEGRQSPGPICESCELLATCVRHSNGWVNIPVESCDVANGYY-C---NARLGSCTNET--G 91

  Fly    70 PL-------TLHCDD----PDNVD------CIFDGKDNIVDDTSSSESDEDDDEEMAKTDPPVTV 117
            |.       ...|..    ||..|      |.|.|...:     ::..|..:|:....|....|:
  Fly    92 PCHPFGIEGNFQCTSQGIFPDPYDCQKYHMCYFVGATLV-----AAAVDCGNDKAFDATTGQCTL 151

  Fly   118 KATKKPRPTTLDKMCAGKKDGVMLTKNGSCQE-------------YYVCKAK-----------KP 158
            ..|                |.|.|.:...|..             :||||:.           .|
  Fly   152 TLT----------------DSVCLQRQYYCPNAGHVAAWPTNPNIFYVCKSTVNQNLNDTIVIYP 200

  Fly   159 HLRSCPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATTGGVCSDEKEN------------S 211
            .|..|.|.:.|  ...:|.       ||.......:|.|:.   :..|..::            .
  Fly   201 SLHRCNDGETF--VDYVCR-------SGSNVLPPSTDDPSV---IIEDPNDDDFSVLPNTCQHVG 253

  Fly   212 LVAHRSDCGKFMLCS--NMMFLVMDCPTGLHFNIATSRC 248
            |:|..:||.|:..||  |.....||||.|.::....|.|
  Fly   254 LMADGNDCRKYYYCSALNGTLRHMDCPNGTYYRPELSSC 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 21/90 (23%)
CBM_14 132..184 CDD:426342 14/75 (19%)
CBM_14 204..256 CDD:426342 16/59 (27%)
CG13806NP_647708.1 CBM_14 105..158 CDD:426342 12/73 (16%)
ChtBD2 247..293 CDD:214696 15/46 (33%)

Return to query results.
Submit another query.