DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-G and obst-B

DIOPT Version :9

Sequence 1:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster


Alignment Length:281 Identity:64/281 - (22%)
Similarity:92/281 - (32%) Gaps:78/281 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TSLCEGKNGGLLPMFGSCKGYYVCADGNAVTGTCEKNTLFN---PLTLHCDDPDNVDCIFDGKDN 90
            |..|...| |..|....|..||.|.||......|....:||   |:...||.|.|:||:...|  
  Fly    83 TEECPEPN-GFYPDSKQCDKYYACLDGVPTERLCADGMVFNDYSPIEEKCDLPYNIDCMKRSK-- 144

  Fly    91 IVDDTSSSESDEDDDEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLTKNGSCQEYYVCKA 155
                                         .:.|:|:.   .|..|.......|.|.|.::|.|..
  Fly   145 -----------------------------LQTPQPSL---HCPRKNGYFGHEKPGICDKFYFCVD 177

  Fly   156 KKPHLRSCPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATTGGVCSDEKENSLVAH----- 215
            .:.::.:||....|:|...||....:...:|...|:       .....|....|:..|.|     
  Fly   178 GQFNMITCPAGLVFNPKTGICGWPDQVGVTGCKSED-------VFDFECPKVNESIAVTHPRYAD 235

  Fly   216 RSDCGKFMLCSNMMFLVMD------CPTGLHFNIATSRCDYP-KIAKCQ------------TKLN 261
            .:||..|.:|.|     .|      |..|..|:.....||:. |:..|.            .:|.
  Fly   236 PNDCQFFYVCVN-----GDLPRRNGCKLGQVFDEEKETCDWARKVPDCADWYKDRLTDKELDELE 295

  Fly   262 ESKSK---SKKPVR-KSKKRR 278
            ..|.|   :|:|.| :.:.||
  Fly   296 NPKPKTTTTKRPPRVRGQSRR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-GNP_648529.1 CBM_14 32..83 CDD:279884 18/53 (34%)
CBM_14 132..184 CDD:279884 13/51 (25%)
CBM_14 204..256 CDD:279884 16/63 (25%)
obst-BNP_609339.1 CBM_14 89..139 CDD:279884 17/50 (34%)
CBM_14 156..204 CDD:279884 12/47 (26%)
CBM_14 233..278 CDD:279884 12/49 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466410
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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