DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-G and cht-1

DIOPT Version :10

Sequence 1:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:168 Identity:46/168 - (27%)
Similarity:67/168 - (39%) Gaps:26/168 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 PPVTVKATKKPRPTTL------------DKMCAGKKDGVMLTKNGSCQEYYVCKAKKPHLRSCPD 165
            ||:|...|.....||.            ..:|:||.||.....| :|..:.:|.:.|.:..|||.
 Worm   450 PPMTSAVTTTTAATTTTTRAATTTTASNTNVCSGKSDGFYPNSN-NCGLFVLCLSSKSYSMSCPS 513

  Fly   166 KQHFSPTRRICMKASEAKCS-----GGTRENKESD-------GPATTGGVCSDEKENSLVAHRSD 218
            ...:|.:.:.|..::.:.||     ..|...|.:.       .|.||.......|: ......||
 Worm   514 GLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKD-GFFGVPSD 577

  Fly   219 CGKFMLCSNMMFLVMDCPTGLHFNIATSRCDYPKIAKC 256
            |.||:.|.|.:....:||.||.|:..|..||.|..:||
 Worm   578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-GNP_648529.1 CBM_14 32..83 CDD:426342
CBM_14 132..184 CDD:426342 14/51 (27%)
CBM_14 204..256 CDD:426342 17/51 (33%)
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351
CBM_14 481..532 CDD:426342 14/51 (27%)
CBM_14 567..615 CDD:426342 17/48 (35%)
Blue background indicates that the domain is not in the aligned region.

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