DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-G and cbd-1

DIOPT Version :10

Sequence 1:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:226 Identity:55/226 - (24%)
Similarity:87/226 - (38%) Gaps:29/226 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GGLLPMFGSC-KGYYVCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSES 100
            |...|: |.| :.|..|.|...|...|....||:..:..|  ...:.|   ||:.|         
 Worm  1035 GSRTPV-GFCVRTYLECTDAGNVEKLCRIGKLFDSHSNRC--VPRIGC---GKEAI--------- 1084

  Fly   101 DEDDDEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLTKNGSCQEYYV-CKAKKPHLRSCP 164
             .|..::|..|.|       ...:|...:..|| ..||..:...|.|...|: |......|:.|.
 Worm  1085 -RDAIKDMIATTP-------APAQPKQFEGRCA-HVDGEAVFSIGVCSSKYLRCSYGASKLQQCS 1140

  Fly   165 DKQHFSPTRRIC-MKASEAKCSGGTRENKESDGPATTGGVCSDEKENSLVAHRSDCGKFMLC-SN 227
            :.:.||..:..| ::.|.:.|:.....:.:....:.......|.||:.|..:..||...:.| ..
 Worm  1141 EDRVFSNDKLECIVRESVSACTVPKNPSIKKYYTSNDQSAFCDGKEDGLYRNERDCSAILQCFGG 1205

  Fly   228 MMFLVMDCPTGLHFNIATSRCDYP-KIAKCQ 257
            .:|....|.:.|.||..|.:|||| |::.|:
 Worm  1206 ELFEHPSCQSSLAFNQLTGKCDYPQKVSGCE 1236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 12/46 (26%)
CBM_14 132..184 CDD:426342 14/53 (26%)
CBM_14 204..256 CDD:426342 18/53 (34%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696
ChtBD2 191..237 CDD:214696
CBM_14 692..743 CDD:426342
CBM_14 785..836 CDD:426342
CBM_14 1108..1161 CDD:426342 14/53 (26%)
CBM_14 1182..1235 CDD:426342 18/52 (35%)
CBM_14 1251..1296 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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