DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-G and cpg-1

DIOPT Version :10

Sequence 1:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:265 Identity:60/265 - (22%)
Similarity:85/265 - (32%) Gaps:86/265 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVLQESTL------AVVQNGF-------AFKTSLCEGKNGGLLPMFGSCKGYYVCADGNAVTGTC 62
            |.|:.:||      :...|||       |..|. |..|..||..:.|....:..|:.|.:....|
 Worm    28 LPLETTTLDGSGDGSGADNGFVSGADAVAIDTD-CSTKEDGLYAIGGCSPQFLTCSGGISRIMDC 91

  Fly    63 EKNTLFNPLTLHCDDPDNV-DCIFDGKDNIVDDTSSSESDEDDDE---------EMAKTDP---- 113
            ..:.:::|..:.|:...|| .|     ..:..|.:|::.....:|         |.|.|.|    
 Worm    92 PADLIYDPRIVACEYSYNVPQC-----GGVPQDVTSTQEAYPSEETTVNPYAPVEEATTTPAEDV 151

  Fly   114 --------------------------PVTVKATKKP---------------RPTT---LDKMCAG 134
                                      ||.|:.|..|               .|.|   :.|.|.|
 Worm   152 TVPEETTTEAYAPVDDYSTTTPAEDVPVPVETTASPYAPIVPYTTGAPAADEPVTRSAVTKSCVG 216

  Fly   135 KKDGVMLTKNGSCQEYY-VCKAKKPHLRSCPDKQHFSPTRRIC---MKASEAKCSGGTRENKESD 195
            |.||  ....|.|.::| .|.........||.:..|...|.||   |...|  |:.|: .|.|..
 Worm   217 KADG--FYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPE--CTNGS-GNDEGS 276

  Fly   196 GPATT 200
            ...||
 Worm   277 ADETT 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 12/51 (24%)
CBM_14 132..184 CDD:426342 17/55 (31%)
CBM_14 204..256 CDD:426342
cpg-1NP_001021159.1 CBM_14 61..113 CDD:426342 12/51 (24%)
rne <116..206 CDD:236766 13/89 (15%)
CBM_14 214..266 CDD:426342 17/55 (31%)
rne <321..499 CDD:236766
CBM_14 <539..576 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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