DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-G and CG43218

DIOPT Version :10

Sequence 1:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001246864.1 Gene:CG43218 / 12798438 FlyBaseID:FBgn0262854 Length:182 Species:Drosophila melanogaster


Alignment Length:155 Identity:36/155 - (23%)
Similarity:56/155 - (36%) Gaps:28/155 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LCEGK-NGGLLPMFGSCKGYYVCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIVDD 94
            :|.|. ...|:|....|.|||:|.||:.....|.:..:|: :.|:       .|:. |:....|.
  Fly    33 ICSGHLVNDLVPDCEDCSGYYICGDGSYEKVKCPQGLIFD-IALN-------TCVL-GQCPRFDG 88

  Fly    95 TSSSESDEDDDEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVM--------LTKNGSCQEYY 151
            |.|:.|          |.||.....|....|.|:....:|..|..:        :.....|:.:|
  Fly    89 TCSANS----------TVPPPVTTTTTTAAPETIPPTPSGPCDNDVTCQLQEKSIPHPTHCRNFY 143

  Fly   152 VCKAKKPHLRSCPDKQHFSPTRRIC 176
            .|..|...|..|...:.|.....:|
  Fly   144 TCYGKCAVLGLCELGKWFDREGNVC 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 14/51 (27%)
CBM_14 132..184 CDD:426342 10/53 (19%)
CBM_14 204..256 CDD:426342
CG43218NP_001246864.1 CBM_14 34..79 CDD:426342 14/52 (27%)
CBM_14 134..177 CDD:426342 8/35 (23%)
Blue background indicates that the domain is not in the aligned region.

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