DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-G and CG42728

DIOPT Version :10

Sequence 1:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001189111.1 Gene:CG42728 / 10178859 FlyBaseID:FBgn0261681 Length:156 Species:Drosophila melanogaster


Alignment Length:178 Identity:38/178 - (21%)
Similarity:61/178 - (34%) Gaps:42/178 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFGLLCVMLVLQESTLAVVQNGFAFKTSLCEGKNGGLLPMFGSCKGYYVCADGNAVTGTCEKNTL 67
            ::||:.|:..:         ||.....  |.|:||.:.....:|....:...|        :|::
  Fly    13 VYGLILVVWGI---------NGLNIPE--CSGQNGFINNTRSNCNYSLINCSG--------QNSM 58

  Fly    68 FNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSESDEDDDEEMAKTDPPVTVKATKKPRPTTLDKMC 132
            |      |.|....:..|...|.:..|.|::..        ..|.|.|...|:....|:.:.:.|
  Fly    59 F------CTDNTTCNANFTCSDILPVDNSTALP--------ISTTPNVVTTASTTVSPSDIRREC 109

  Fly   133 AGKKDGVMLTKNGS----CQEYYVCKAKKPHLRSCPDKQHFSPTRRIC 176
               :.||  ||..|    |..:|.|......:..||....|.|....|
  Fly   110 ---RQGV--TKRFSYPQNCNYFYYCVDGFLLVEQCPIGYAFDPQTGAC 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 10/50 (20%)
CBM_14 132..184 CDD:426342 14/49 (29%)
CBM_14 204..256 CDD:426342
CG42728NP_001189111.1 CBM_14 117..152 CDD:426342 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

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