DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17826 and Gasp

DIOPT Version :9

Sequence 1:	NP_648528.1	Gene:	CG17826 / 39354	FlyBaseID:	FBgn0036227	Length:	751	Species:	Drosophila melanogaster
Sequence 2:	NP_649611.2	Gene:	Gasp / 40745	FlyBaseID:	FBgn0026077	Length:	258	Species:	Drosophila melanogaster

Alignment Length:	198	Identity:	53/198 - (26%)
Similarity:	78/198 - (39%)	Gaps:	54/198 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   571 PAD--CAGYLQCINGVFVARKCSATQFFNTTLKECEVDTENVCIPKTCD----PDCCD------- 622
            |.|  |..|.:|.|||...:.|.....|:.|  :.:..|||      ||    .||.|
  Fly    31 PHDTSCDKYWKCDNGVSELKTCGNGLAFDAT--DSKYLTEN------CDYLHNVDCGDRTELEPP 87

  Fly   623 --VPNNS----IWPVEKNCSAFYQCVNGNKYEQRCSNNLQYNSIIEQCDYPENV-QCDDG----- 675
              .|:.|    |:|.|..|..|:.|.||.....:||..|.|:.....|.:.:.| :|.:.
  Fly    88 ITTPHCSRLYGIFPDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVANG 152

  Fly   676 -SAPPSGPIAGPSGTY--------CESHGRCV-------GQRDGTMF----ADASGDCSSNYVVC 720
             |.|.:|.:|. :|::        |..:..|:       |...||:|    :|.:|:|.....|.
  Fly   153 FSCPAAGELAN-AGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDSDGTGNCEDPEDVP 216

  Fly   721 QCE 723
            .||
  Fly   217 GCE 219

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17826	NP_648528.1	CBM_14	36..74	CDD:279884
		ChtBD2	<89..124	CDD:214696
		CBM_14	145..184	CDD:279884
		CBM_14	251..290	CDD:279884
		CBM_14	357..396	CDD:279884
		CBM_14	463..502	CDD:279884
		CBM_14	563..610	CDD:279884	13/40 (33%)
		CBM_14	621..670	CDD:279884	16/61 (26%)
		CBM_14	697..749	CDD:279884	11/38 (29%)
Gasp	NP_649611.2	ChtBD2	21..72	CDD:214696	15/48 (31%)
		CBM_14	97..144	CDD:366726	14/46 (30%)
		CBM_14	170..218	CDD:366726	10/47 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45443977
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23301
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940