DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17826 and CG7252

DIOPT Version :9

Sequence 1:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_648527.1 Gene:CG7252 / 39353 FlyBaseID:FBgn0036226 Length:474 Species:Drosophila melanogaster


Alignment Length:601 Identity:157/601 - (26%)
Similarity:237/601 - (39%) Gaps:172/601 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 LETCVQDDEGICVNCKEGSTKPLA-DCTMYEICSGGKY-VTKSCDSGYYWNSQSEVCDVDNGQCN 238
            |:|.|.....:|.|.::|:..||| .|:.:.:|..|:. :..||..|.::|.:...||..     
  Fly    19 LQTVVAQLTNVCQNQEDGTRLPLATHCSRFVVCLKGEVSIIGSCPRGLHFNRELRECDFQ----- 78

  Fly   239 GNGTTCTDGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNVTLETCVQDDEGICVNCKEGSTKP 303
                         ...||.|..|.:.   |..||        |.:.|.::.:....:..|.:|..
  Fly    79 -------------WRANCLGLSAFAE---VDDQC--------TCDCCAEECQDPIDDIDETTTAV 119

  Fly   304 LADCTMYEICSGGKYVTKSCDSGYYWNSQSEVCDVDNGQ-------------CNGNGTTCTDGE- 354
            ..||......|    .|:..||....::.::..|.:|..             |..:.|.|.:.: 
  Fly   120 TEDCDPDTTTS----ATEPSDSTEPTDATTDFDDPNNSSNTTPSSPSVVPSYCKSSRTDCVNQKT 180

  Fly   355 -LKVD-PTNCAGYLACSNGNWVSKQCADGAYFNATLETCVQDDEGICVNCKEGSTKPLAD-CTMY 416
             ..:| |..|..::.|:||.....||..|.|||..::.|   |....|:|     .|.|| .|..
  Fly   181 GTYIDMPGICVRFIQCNNGCAEEFQCPSGLYFNTAIDDC---DYWWNVDC-----TPTADGSTEI 237

  Fly   417 EICSGGKYVTKSCDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCAGYLACSNGNWVS 481
            |..||     .:|.|              .|:|.|.    .||.:..|| |..|:..|.....::
  Fly   238 EGPSG-----TTCSS--------------QGECAGK----RDGYMIADP-NSNGFFVCQCQCPIA 278

  Fly   482 KQCADGAYFNATLETC--VQDDEGICVNCKEGSTKPLADCTMYEICSGGKYVTKSCDSGYYWNSQ 544
            ..|::|..||.|.:.|  ::|                                            
  Fly   279 MPCSEGLKFNETAQVCDWIKD-------------------------------------------- 299

  Fly   545 SEVCDVDNGQCNGNGTTCTENEVKVNPADCAGYLQCINGVFVARKCSATQFFNTTLKECEVDTEN 609
                              |::.:..:...|.|.|                .:|.||.:|:. .||
  Fly   300 ------------------TKSAIGSSAVQCYGDL----------------VYNATLDQCDY-PEN 329

  Fly   610 VCIPK----TCDPDCCDVPNNSIWPVEKNCSAFYQCVNGNKYEQRCSNNLQYNSIIEQCDYPENV 670
            . :||    |....|.:.|...::|||..|:.||:|......||.|.|||.||...|:|:||::.
  Fly   330 Y-VPKVECNTTSTVCQNQPEGELFPVEGKCNMFYKCNFNCAVEQYCPNNLVYNPNTEECEYPQDY 393

  Fly   671 QCDDGSAPPSGPIAGPSGTYCESHGRCVGQRDGTMFADASGDCSSNYVVCQCECEVNFTCSSGLL 735
            .|.....|||||.|||||..|||:|||:|||:|| :..::.:| ||||||||||||...|:.||.
  Fly   394 VCPWEYTPPSGPNAGPSGIACESNGRCMGQREGT-YLKSTTNC-SNYVVCQCECEVEMECADGLY 456

  Fly   736 FNLQVKSCDWPDNVKC 751
            ::..:::|::.:.|.|
  Fly   457 WDESLQTCNYKNQVTC 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17826NP_648528.1 CBM_14 36..74 CDD:279884
ChtBD2 <89..124 CDD:214696
CBM_14 145..184 CDD:279884 3/7 (43%)
CBM_14 251..290 CDD:279884 9/38 (24%)
CBM_14 357..396 CDD:279884 13/39 (33%)
CBM_14 463..502 CDD:279884 12/40 (30%)
CBM_14 563..610 CDD:279884 9/46 (20%)
CBM_14 621..670 CDD:279884 20/48 (42%)
CBM_14 697..749 CDD:279884 23/51 (45%)
CG7252NP_648527.1 CBM_14 30..79 CDD:279884 15/66 (23%)
CBM_14 175..226 CDD:279884 15/53 (28%)
CBM_14 251..296 CDD:279884 15/49 (31%)
CBM_14 343..394 CDD:279884 21/50 (42%)
CBM_14 420..471 CDD:279884 23/52 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472918
Domainoid 1 1.000 47 1.000 Domainoid score I19154
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I3601
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D29657at33392
OrthoFinder 1 1.000 - - FOG0012713
OrthoInspector 1 1.000 - - otm14392
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
88.000

Return to query results.
Submit another query.