DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17826 and CG5897

DIOPT Version :10

Sequence 1:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001356901.1 Gene:CG5897 / 39346 FlyBaseID:FBgn0036220 Length:343 Species:Drosophila melanogaster


Alignment Length:452 Identity:98/452 - (21%)
Similarity:143/452 - (31%) Gaps:181/452 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GVALCLIISL--------------------FMGSSSAVCCSEG---DTK-VDADDCTKYLI---- 46
            |..||:|:::                    ::|..|. |.:.|   |.| :|...||:.|:    
  Fly     7 GFHLCVILAIVAEIRGFSMEDKCKLWAGTGYIGDPSD-CQAWGYCQDNKLIDRRSCTEGLLYSFR 70

  Fly    47 ---C-------CHGEFVSKSCASGSYWNSELNICVVDDGQCRPPTCVDGEITPNPDDCAGYLECV 101
               |       ||.: :|:.|||...||                      ...||.||..:::|.
  Fly    71 DGTCKRASDTICHSQ-LSEICASLEPWN----------------------YVANPADCRRFVKCA 112

  Fly   102 D------GIIVILTCPDGDYFNSTLNRCVEDTCGVCNGNGTTCT---DGELKVDPTNCAGYLACS 157
            |      |     .|..|..|::....|:|:..|....|  .|:   ||....||.:|..|..|.
  Fly   113 DLDDPTWG-----DCGVGQVFSNKKQTCLEEVAGCPQDN--ICSHMKDGSFVGDPKSCQIYYKCH 170

  Fly   158 NGNWVSKQCADGAYFNA--------ILETCVQDDEGICVNCKEGSTKPLADCTMYEICSGGKYVT 214
            ||......|:.|.|||.        :...|.:|||...:      |.|..|   :.||       
  Fly   171 NGFGTMLNCSVGRYFNRKTGNCQSWMPHYCSKDDEDNIL------TPPSTD---HNIC------- 219

  Fly   215 KSCDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCAGYLACSN----GNWVSKQCADG 275
                |.||...:..|                  :|..|...|.||.:|::    |.|.|  |..|
  Fly   220 ----SKYYQRDRDGV------------------QLLPDLMTCYGYYSCTSQFDVGKWSS--CPWG 260

  Fly   276 AYFNVTLETCVQDDEGICVNCKEGSTKPLADCTMYEICSGGKYVTKSCDSGYYWNSQSEVCDVDN 340
            .:|....:.|....:..|               .|:.|:.              .:|..|..::.
  Fly   261 LHFEWWSQRCGSPKDNSC---------------SYDRCAN--------------RNQLMVATINT 296

  Fly   341 GQCNGNGTTCTDGELKVDPTNCAGYLACSNGNWVSKQC-ADGAYFNATLETCVQD--DEGIC 399
            | |. ..|.|.|...|                 .|::| .|..|||..|..|..:  :..:|
  Fly   297 G-CR-EFTICQDNRSK-----------------SSQKCPEDYPYFNELLRQCTDEYPNHRVC 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17826NP_648528.1 CBM_14 36..74 CDD:426342 13/51 (25%)
ChtBD2 <89..124 CDD:214696 10/40 (25%)
CBM_14 145..184 CDD:426342 14/46 (30%)
CBM_14 251..290 CDD:426342 12/42 (29%)
CBM_14 357..396 CDD:426342 8/41 (20%)
CBM_14 463..502 CDD:426342
CBM_14 563..610 CDD:426342
CBM_14 621..670 CDD:426342
CBM_14 697..749 CDD:426342
CG5897NP_001356901.1 ChtBD2 146..192 CDD:214696 16/47 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.