DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17826 and CG13312

DIOPT Version :9

Sequence 1:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster


Alignment Length:406 Identity:91/406 - (22%)
Similarity:124/406 - (30%) Gaps:134/406 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 TCGVCNG-NGTTCTDG----ELKVD------PTNC-AGYLACSNGNWVSKQCADGAYFNAILETC 179
            ||.|||. |..||...    ..:||      ||:| :||:..|..:.|..|..|.|         
  Fly    29 TCNVCNTVNNLTCYSSTQMQSCQVDVLSTATPTDCPSGYVCVSGSSGVLCQPEDSA--------- 84

  Fly   180 VQDDEGICVNCKEGSTKPLADCT---MYEICSGGKYVTKS---CDSGYYWNSQSEVCDVDNGQCN 238
             .|.:..|..|.:........||   .:.:|.|...|..|   |.|||       ||::::.|..
  Fly    85 -SDSQADCQECNKCDETQTFACTGTQSFALCLGTDTVQDSVGTCASGY-------VCNINDTQIC 141

  Fly   239 GNGTTCTDGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNVTLETCVQDDEGICVNCKEGSTKP 303
            |   ...||   |.||       ||             |.:.:..|.|.............::..
  Fly   142 G---LPADG---VMPT-------CS-------------YSDDSTTTTVSSTTSSTTAAPPSTSSA 180

  Fly   304 LADCTMYEICSGGKYVTKSCDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCAGYLAC 368
            ...|...:  |.|||..     ||  |:.                           |.|..|:.|
  Fly   181 STYCAAVQ--SQGKYAV-----GY--NAY---------------------------TTCRQYIYC 209

  Fly   369 S--NGNWVSK--QCADGAYFNATLETCVQDDEGIC-VNCKEGSTKPLADCTMYEICSGGKYVTKS 428
            :  :|:|:.:  .|....||::..|.||......| ......||...|..|    .:...|....
  Fly   210 TLVDGSWIGQTYTCPGSMYFDSASEMCVSTMPSTCSTTATTSSTTTAAPTT----SNPEAYCQAM 270

  Fly   429 CDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCAGYLAC--SNGNWVSKQ--CADGAY 489
            ..:|||                   ...||..     |.|..|:.|  :.|.|....  |....|
  Fly   271 QSAGYY-------------------PVGTDAS-----TTCHQYIDCFLNGGTWGGNMYTCPGSLY 311

  Fly   490 FNATLETCVQDDEGIC 505
            :|:...|||......|
  Fly   312 YNSASRTCVSTLPSTC 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17826NP_648528.1 CBM_14 36..74 CDD:279884
ChtBD2 <89..124 CDD:214696
CBM_14 145..184 CDD:279884 13/45 (29%)
CBM_14 251..290 CDD:279884 8/38 (21%)
CBM_14 357..396 CDD:279884 12/42 (29%)
CBM_14 463..502 CDD:279884 12/42 (29%)
CBM_14 563..610 CDD:279884
CBM_14 621..670 CDD:279884
CBM_14 697..749 CDD:279884
CG13312NP_648260.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.