DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17826 and obst-I

DIOPT Version :9

Sequence 1:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_728731.1 Gene:obst-I / 317966 FlyBaseID:FBgn0052304 Length:219 Species:Drosophila melanogaster


Alignment Length:288 Identity:63/288 - (21%)
Similarity:101/288 - (35%) Gaps:99/288 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 GQCNGNGTTCTDGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNATLETCVQDDEGICVNCKEG 405
            |:..|||:..   ||::|.              .::.|.|..|||.|::.||..|...|.|.:.|
  Fly    19 GKGLGNGSYL---ELRLDA--------------AAESCPDDYYFNETIQACVSTDTTSCTNHQIG 66

  Fly   406 STKPLADCTMYEICSGGKYVTKSCDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCAG 470
            .. |:| ..|.|.|                                   .|.|..|::       
  Fly    67 KC-PMA-TEMDEFC-----------------------------------VCKDKHLQI------- 87

  Fly   471 YLACSNGNWVSKQCADGAYFNATLETCVQDDEGICVNCKEGST-KPLADCT---MYEICSGGKYV 531
                    |   :|.:|.||:|....|....    |.|::..| .|..:.|   ::.:|..||:.
  Fly    88 --------W---KCPEGTYFDANRLVCRVGS----VECQDDYTPSPCPNSTASDVFCLCIDGKWH 137

  Fly   532 TKSCDSGYYWNSQSEVC---DVDNGQCNGNGTTCTENEVKVNPADCAGYLQCINGVFVARKCSAT 593
            ...|.:|:.::.:.::|   ..|:.:...:...|....:..:||||:||..|      ..|.|..
  Fly   138 LNYCPTGFTFDDELQICLNTGSDDDELPSSSGKCQRLGLFGDPADCSGYYHC------REKGSDI 196

  Fly   594 QFFNTTLKECEVDT-----ENVCIPKTC 616
            ::|     .|.|.|     ...|:..||
  Fly   197 EYF-----RCSVGTIFNLISFACVTGTC 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17826NP_648528.1 CBM_14 36..74 CDD:279884
ChtBD2 <89..124 CDD:214696
CBM_14 145..184 CDD:279884
CBM_14 251..290 CDD:279884
CBM_14 357..396 CDD:279884 9/38 (24%)
CBM_14 463..502 CDD:279884 7/38 (18%)
CBM_14 563..610 CDD:279884 13/51 (25%)
CBM_14 621..670 CDD:279884
CBM_14 697..749 CDD:279884
obst-INP_728731.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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