DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17826 and Muc68E

DIOPT Version :10

Sequence 1:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster


Alignment Length:221 Identity:66/221 - (29%)
Similarity:86/221 - (38%) Gaps:61/221 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 TCTDG-ELKVDPTNCAGYLACSNGNWVSKQCADGAYFNAILETCVQDDEGICVNCKEGSTKP--- 197
            :|:.| :....||||..|:.||||:.:..:|....|::.....| ..|.|:|.|..|.|...   
  Fly  1625 SCSTGYQYLPHPTNCHKYIHCSNGHELIMECPANLYWDYHKFVC-SGDSGVCYNDTENSNPEEKV 1688

  Fly   198 -------LA---DCTMYEICSGGKYVTKSCDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVD 252
                   ||   |||||..||.|..:.:.|....|||.:.:.||..|..|               
  Fly  1689 CGPGVDFLAHPTDCTMYLQCSNGVALERKCPDPLYWNPEIKSCDWSNKYC--------------- 1738

  Fly   253 PTNCAGYLACSNGNWVSKQCADGAYFNVTLETCVQDDEGICVNCKEGSTKPLADCTMYEICSGGK 317
             ||    |..|.    |..||.|..|||.                      .:||:.|..|.|.:
  Fly  1739 -TN----LRASQ----SISCAAGMNFNVF----------------------QSDCSKYVKCFGLR 1772

  Fly   318 YVTKSCDSGYYWNSQSEVCDVDNGQC 343
            .|..||:||.|||..|:||:.....|
  Fly  1773 GVVMSCNSGLYWNPVSQVCEKSRRFC 1798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17826NP_648528.1 CBM_14 36..74 CDD:426342
ChtBD2 <89..124 CDD:214696
CBM_14 145..184 CDD:426342 12/38 (32%)
CBM_14 251..290 CDD:426342 11/38 (29%)
CBM_14 357..396 CDD:426342
CBM_14 463..502 CDD:426342
CBM_14 563..610 CDD:426342
CBM_14 621..670 CDD:426342
CBM_14 697..749 CDD:426342
Muc68ENP_996064.1 rne <158..303 CDD:236766
MDN1 300..1293 CDD:444083
rne <1358..1503 CDD:236766
ChtBD2 1626..1668 CDD:214696 13/41 (32%)
ChtBD2 1688..1734 CDD:214696 16/45 (36%)
ChtBD2 <1761..1791 CDD:214696 14/29 (48%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.