DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17826 and cbd-1

DIOPT Version :10

Sequence 1:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:853 Identity:192/853 - (22%)
Similarity:293/853 - (34%) Gaps:203/853 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QSRTKHYGVALCLIISLFMGSSSAVCCSEGDTKVDAD-----------DCTKYLICCHGEFVSK- 55
            :.|:.:||...    |::...|:.:...:.....|..           ||....|.|.|..::: 
 Worm   538 RKRSAYYGTEQ----SVYGQQSAQISARQAQVNKDCQQYTTPTFLTFGDCFDQFIFCSGNGINRM 598

  Fly    56 -SCASGSYWNSELNICVVDDGQCRPPTC-VDGEI------TPNPDDCAGYLECV--DGIIVILTC 110
             :|..|..::..|..|        ..|| |...|      |...||.:...|.:  ||:....|.
 Worm   599 AACPIGETFDKTLRSC--------SETCGVSTTIVAVTIGTQTSDDLSAPSEYIENDGVTTQSTW 655

  Fly   111 PD--------GDYFNSTL----------------NRCVEDTCGVCNGNGTTCTDGELKVDPTNCA 151
            .|        ..|.:.|.                :||..|..|:.:               ..|:
 Worm   656 NDQPSTTQAPNSYESYTTQYSSNDVPSTSAAPIGDRCSLDASGLFS---------------LGCS 705

  Fly   152 -GYLACSNGNWVSKQCADGAYFNAILETCVQDDEGICVNC-KEGSTKPLADCTMYEICSGGKYVT 214
             .|:.||||..:.::|.:..|||...:.|...||  ...| .:|||            |.....|
 Worm   706 QKYIQCSNGAAIVRRCGESLYFNEATQECTYRDE--VPECGSQGST------------SSPVITT 756

  Fly   215 KSCD-SGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCA-GYLACSNGNWVSKQCADGAY 277
            ...| |..|:...|:  ||.:......|..|......:....|: .|:.||:.....::|....|
 Worm   757 PGQDQSSNYYGIPSD--DVPSTTQTPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLY 819

  Fly   278 FNVTLETC-VQDDEGIC--VNCKEGSTKPLADCTMYEICSGGKYVTKSCDSGYYWNSQSEVCDVD 339
            |:...::| .:|:...|  .:....||.|..|.|...........|....|...:.....|..||
 Worm   820 FDERSQSCRFRDEVFKCQTADVSSSSTVPYLDFTTTPASPSEDEPTTYEPSVAPYIPSVTVNPVD 884

  Fly   340 NGQCNGNGTTCTDGELKVDPTNCAG-YLACSNGNWVSK-QCADGAYFNATLETCVQDDEGICVNC 402
                     |||........|.|:. |..||:|..:|. .|..|..::.:::           .|
 Worm   885 ---------TCTSLSDGTHGTGCSSFYFVCSHGRLISSGNCQLGEGYDPSVQ-----------GC 929

  Fly   403 KEGSTKPLADCTMYEICSGGKYVTKSCDSGYY----WNSQSEVCDVDNGQC----NGNGTTCTDG 459
            :..|..|...|...|:         :.|:|..    :.:..||........    :|...|...|
 Worm   930 RTFSEIPARACDEQEV---------TTDAGLVQLMPYKTLEEVLTTTEAATTVANDGPTDTYITG 985

  Fly   460 ELKVDPTNCAGYLACSNGNWVSKQCADGAYFNATLETCVQDDEGICVNCKEGSTKPLADCT-MYE 523
            ..|...|:...|.........|.:..|.|..::..|.  :||......|..||..|:..|. .|.
 Worm   986 STKYSTTDSGEYTIPYGDETTSTRSYDRADNDSEDEE--EDDVEHDQKCTVGSRTPVGFCVRTYL 1048

  Fly   524 ICSGGKYVTKSCDSGYYWNSQSEVCDVDNGQCNGN----------GTTCTENEVKVNPADCA--- 575
            .|:....|.|.|..|..::|.|..| |....|...          .||....:.|.....||   
 Worm  1049 ECTDAGNVEKLCRIGKLFDSHSNRC-VPRIGCGKEAIRDAIKDMIATTPAPAQPKQFEGRCAHVD 1112

  Fly   576 ------------GYLQCINGVFVARKCSATQFFNTTLKECEV-DTENVC-IPKTCDPDC------ 620
                        .||:|..|....::||..:.|:....||.| ::.:.| :||  :|..      
 Worm  1113 GEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVSACTVPK--NPSIKKYYTS 1175

  Fly   621 ------CDVPNNSIWPVEKNCSAFYQCVNGNKYEQ-RCSNNLQYNSIIEQCDYPENVQCDDGSAP 678
                  ||...:.::..|::|||..||..|..:|. .|.::|.:|.:..:||||:.|        
 Worm  1176 NDQSAFCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKV-------- 1232

  Fly   679 PSGPIAGPSGTYCESHGRCVGQ--RDGTMFADASGDCSSNYVVCQCECEVNFTCSSGLLFNLQVK 741
                    ||  ||:||:..|:  ..|:..|||: :|...| .|....:|..||.||.:||..:.
 Worm  1233 --------SG--CENHGQTNGECSEHGSFIADAN-NCEVFY-RCVWGRKVVMTCPSGTVFNPLLS 1285

  Fly   742 SCDWPDNV 749
            .||||..|
 Worm  1286 VCDWPSAV 1293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17826NP_648528.1 CBM_14 36..74 CDD:426342 10/50 (20%)
ChtBD2 <89..124 CDD:214696 10/60 (17%)
CBM_14 145..184 CDD:426342 11/39 (28%)
CBM_14 251..290 CDD:426342 9/40 (23%)
CBM_14 357..396 CDD:426342 9/40 (23%)
CBM_14 463..502 CDD:426342 7/38 (18%)
CBM_14 563..610 CDD:426342 13/62 (21%)
CBM_14 621..670 CDD:426342 17/49 (35%)
CBM_14 697..749 CDD:426342 19/53 (36%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696
ChtBD2 191..237 CDD:214696
CBM_14 692..743 CDD:426342 16/67 (24%)
CBM_14 785..836 CDD:426342 10/50 (20%)
CBM_14 1108..1161 CDD:426342 12/52 (23%)
CBM_14 1182..1235 CDD:426342 20/70 (29%)
CBM_14 1251..1296 CDD:426342 18/45 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.