DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17826 and CG43294

DIOPT Version :9

Sequence 1:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001356903.1 Gene:CG43294 / 12798218 FlyBaseID:FBgn0262986 Length:143 Species:Drosophila melanogaster


Alignment Length:166 Identity:48/166 - (28%)
Similarity:62/166 - (37%) Gaps:40/166 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ICVVDDGQCRPPTCVDGEITPNPDDCAGYLECVDGIIVILTCPDGDYFNSTLNRCVEDTCGVCNG 133
            :|.|..|.|...|.   :..|.|:||..|.|     ..:|.||...|:||.|.:|...|...|: 
  Fly    11 LCAVFSGFCMAQTV---QRWPFPNDCHRYYE-----TRLLDCPPEFYWNSQLLQCNSQTPVGCS- 66

  Fly   134 NGTTCTDGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNA--ILETCVQDDEGICVNCKEGSTK 196
                      .:||..          ||      :.:|.|:  |.|....|...:|.| |.....
  Fly    67 ----------SIDPIT----------NW------NNSYPNSPPIKEPENSDLTKLCEN-KLNQLI 104

  Fly   197 PL-ADCTMYEICSGGKYVTKSCDSGYYWNSQSEVCD 231
            |. ||||.:..|....:| ..|....|||||...||
  Fly   105 PYPADCTKFIRCDYLPFV-MCCPQYLYWNSQLLTCD 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17826NP_648528.1 CBM_14 36..74 CDD:279884 2/4 (50%)
ChtBD2 <89..124 CDD:214696 13/34 (38%)
CBM_14 145..184 CDD:279884 9/40 (23%)
CBM_14 251..290 CDD:279884
CBM_14 357..396 CDD:279884
CBM_14 463..502 CDD:279884
CBM_14 563..610 CDD:279884
CBM_14 621..670 CDD:279884
CBM_14 697..749 CDD:279884
CG43294NP_001356903.1 CBM_14 96..139 CDD:307643 16/44 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.