DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7252 and CG4835

DIOPT Version :9

Sequence 1:NP_648527.1 Gene:CG7252 / 39353 FlyBaseID:FBgn0036226 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster


Alignment Length:491 Identity:116/491 - (23%)
Similarity:166/491 - (33%) Gaps:127/491 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NVCQNQEDGTRLPLATHCSRFVVCLKGEVSIIGSCPRGLHFNRELRECDFQWRANCLGLSAFAEV 92
            |.|::::|||......:||.:::|...:|. :|.||....||.:|..||......|||       
  Fly   391 NDCKDEKDGTIFAYIGNCSEYLICKDNQVQ-MGHCPPNTLFNPDLLVCDEPDDVVCLG------- 447

  Fly    93 DDQCTCDCCAEECQDPIDDIDETTTAVTEDCDPDTTTSATEPSDSTEPTDATTDFDDPNNSSNTT 157
                                |.|||       |..||..|..::.|.||..||        :..|
  Fly   448 --------------------DRTTT-------PIPTTIPTTTTEKTTPTTTTT--------TVAT 477

  Fly   158 PSSPSVVPSYCKSSRTDCVNQKTGTYIDMPGICVRFIQCNNGCAEEF-QCPSGLYFNTAIDDCDY 221
            ...|..:          |..|:.|.....|..|.::..|..|..... .|..|.||:.:...|  
  Fly   478 TLGPDQL----------CDGQELGASFSYPDDCSKYYLCLGGGQWTLAPCIYGSYFDPSTGQC-- 530

  Fly   222 WWNVDCTPTA---------------------------DGSTEIEGPSGTTCSSQGECAGKRDGYM 259
              ..|..|.|                           ..:|..|..:.|.....|.|.|:.:...
  Fly   531 --GPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTTTVAPKTGICGGRNENEN 593

  Fly   260 IADPNS-NGFFVCQCQCPIAMPCSEGLKFNETAQVC--DWIKDTKSAIGSSAVQCYGDLVYNATL 321
            ||.||: ..:.||....|||..|.:|..|:...:.|  ||.:.          .|.|| ....||
  Fly   594 IAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDES----------DCEGD-QSTTTL 647

  Fly   322 DQCDYPENYVPKVECNTTSTVCQNQPEGELFPVEGKCNMFYKCNFNCAVEQY------CPNNLVY 380
            :    |....|..|    .|:|.|... :.||....|..|.:|     |:.|      |.....|
  Fly   648 E----PGYTRPPPE----PTMCTNSSR-DTFPYPDNCQWFIRC-----VDDYIYMMDVCNCGEYY 698

  Fly   381 NPNTEEC--EYPQDYVCPWEYTPPSGPNAGPSGIAC-----ESNGRCMGQREGTYLKSTTNCSNY 438
            :|.||:|  :.|.| .|.|:||..:...:.|:....     ...|.|....:|..:....:||.|
  Fly   699 DPITEKCGADVPSD-ACRWDYTSTTSTTSEPTTTTAVTRPPPQKGPCDDVEDGALVAYPNDCSKY 762

  Fly   439 VVCQCECEVEMECADGLYWDESLQTCNYKNQVTCTL 474
            :.|.....|..||..|..:...|..|...:...|::
  Fly   763 IQCDRPIAVAFECEKGDEFSVELGKCVDASLANCSI 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7252NP_648527.1 CBM_14 30..79 CDD:279884 16/48 (33%)
CBM_14 175..226 CDD:279884 12/51 (24%)
CBM_14 251..296 CDD:279884 15/47 (32%)
CBM_14 343..394 CDD:279884 17/58 (29%)
CBM_14 420..471 CDD:279884 12/50 (24%)
CG4835NP_647965.3 CBM_14 51..103 CDD:279884
CBM_14 185..237 CDD:279884
CBM_14 273..322 CDD:279884
CBM_14 393..444 CDD:279884 16/51 (31%)
CBM_14 485..539 CDD:279884 14/57 (25%)
CBM_14 585..638 CDD:279884 17/62 (27%)
CBM_14 661..714 CDD:279884 17/59 (29%)
CBM_14 744..796 CDD:279884 12/51 (24%)
CBM_14 914..962 CDD:279884
CBM_14 1175..1212 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472928
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D29657at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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