DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7252 and cpg-2

DIOPT Version :9

Sequence 1:NP_648527.1 Gene:CG7252 / 39353 FlyBaseID:FBgn0036226 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:528 Identity:114/528 - (21%)
Similarity:172/528 - (32%) Gaps:144/528 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLIGGLQTVVAQLTNVCQNQEDGTRLPLATHCS-RFVVCLKGEVSIIGSCPRGLHFNRELRECD 76
            |.|:........|....|.|..||  |.....|. :|:.| .|.::.|..||..|.:|..|..||
 Worm     7 LTLLAFATAANGQFLQDCTNALDG--LYALGECEPQFLTC-SGGIARIMDCPADLIYNEPLLICD 68

  Fly    77 FQWRANCLGLSAFAEVDDQCTCDCCAEECQDPIDDIDETTTAVTEDCDPDTTTSATEPSDSTEPT 141
              ||.|.:|                   |:...:...||:...:.:...:.:...:..: |.|.:
 Worm    69 --WRHNVIG-------------------CEGSGESSGETSGEGSGESSGEASGEGSGEA-SGEGS 111

  Fly   142 DATTDFDDPNNSSNTTPSSPSVVPSYCKSSRTDCVNQKTGTYIDMPGICVRFIQCNNGCAEEFQC 206
            ...:.......|...:.|....|.:.|:       |.:.|.| ...|....:..|....|....|
 Worm   112 GEASGEGSGEASGEGSGSGEETVENVCE-------NLEDGAY-SSGGCTTYYFFCTTNTARFLSC 168

  Fly   207 PSGLYFNTAIDDCDYWWNV------DCTPTADGSTEIEG-----------------PSGTTCSSQ 248
            |:.|:::.....| .|.::      |.|.| |||.|..|                 .||.: |.|
 Worm   169 PTPLFYDADSQKC-IWKSLVEECKEDLTIT-DGSGETSGEGSGEASGEASGEGSGEASGES-SGQ 230

  Fly   249 GE--------------CAGKRDGYMIADPN---SNGFFVCQCQCPIAMPCSEGLKFNETAQVCDW 296
            |.              |.||.||   ..||   |..|..|.......|.|...|.||.|..||||
 Worm   231 GSGEASGEGSGELEPTCEGKADG---IHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDW 292

  Fly   297 IKDTKSAIGSSAVQCYGDLVYNATLDQCDYPENYVPKVECNTTSTVCQNQPEGELFPVEGKCNMF 361
            .:|.....|....|           ..|: .:.|....:|:::.|.|.|          |:    
 Worm   293 PRDVAECAGLPTPQ-----------PTCE-EDGYFSFGQCSSSFTACTN----------GR---- 331

  Fly   362 YKCNFNCAVEQYCPNNLVYNPNTEECEYPQDYVCPWEYTPPSGPNAGPS---------------- 410
                   |:..:||..|.::.:|..|:|..:..   |....||..:|.:                
 Worm   332 -------AIVMFCPAGLKFSESTVRCDYESNVS---ECQETSGEESGEASGEQSGEGSGEASGEA 386

  Fly   411 -------GIACESNGRCMGQREGTYLKSTTNCSNYVV-CQCECEVEMECADGLYWDESLQTCNY- 466
                   |...|...:|:|...|.:   ...||..|: ||.......||...|.:::....|:| 
 Worm   387 SGESSGEGSGVEEQNQCVGLDNGLH---AIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448

  Fly   467 KNQVTCTL 474
            :..:.|.:
 Worm   449 QTSLKCLI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7252NP_648527.1 CBM_14 30..79 CDD:279884 17/49 (35%)
CBM_14 175..226 CDD:279884 11/56 (20%)
CBM_14 251..296 CDD:279884 18/47 (38%)
CBM_14 343..394 CDD:279884 10/50 (20%)
CBM_14 420..471 CDD:279884 13/52 (25%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:279884 21/75 (28%)
CBM_14 138..190 CDD:279884 12/60 (20%)
ChtBD2 245..293 CDD:214696 19/50 (38%)
CBM_14 311..359 CDD:279884 13/71 (18%)
CBM_14 403..454 CDD:279884 13/53 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CXJD
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I3601
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7642
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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