DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7252 and Gm30500

DIOPT Version :9

Sequence 1:NP_648527.1 Gene:CG7252 / 39353 FlyBaseID:FBgn0036226 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_017171830.1 Gene:Gm30500 / 102632425 MGIID:5589659 Length:614 Species:Mus musculus


Alignment Length:511 Identity:102/511 - (19%)
Similarity:149/511 - (29%) Gaps:179/511 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TVVAQLTN------VCQNQEDGTRLPLATHCSRFVVCLKGEVSIIG-----SCPRGLHFNRELRE 74
            |.|||.|:      |.:...:..:..:..|.:....|..|....:|     .||.|...:|    
Mouse    61 TPVAQATSALLKPGVWRRGAEPAQPGVGFHVTAETACPVGHFCPVGLGMALPCPVGTFSDR---- 121

  Fly    75 CDFQWRANCLGLSAFAEVDDQC-TCD----CCAEECQDPIDDIDETTTAVTEDCDPD--TTTSAT 132
                         .|..:..:| .|.    |.|.....|           :..|.|.  ..:..:
Mouse   122 -------------MFLSMSSECLPCPPGHFCAASGLSAP-----------SGPCAPGYFCLSGVS 162

  Fly   133 EPSDSTEPTDATTDFDDPNNSSNTTPSSPSVVPSYCKS-------SRTDCVNQKTG--------T 182
            .|:    || ..:....|....:..|...| :|..|::       .:..|.....|        :
Mouse   163 SPT----PT-GRSGHGGPCPQGHFCPRGTS-LPQPCRAGSYGSLLGQVSCFPCPAGYYCPENITS 221

  Fly   183 YIDMPGICVRFIQCNNGC--AEEFQCPSGLYFNT-----AIDDCDYWWNVDCTP-TADGSTEIEG 239
            |...|  |.....|..|.  |.:|.||.| |:|.     ::|.|     :.|.| ...|...:..
Mouse   222 YSGYP--CPAGFYCPRGTKHAAQFPCPRG-YYNPDPLTHSLDSC-----LPCPPGHYCGQENLTK 278

  Fly   240 PSGTTCSSQGECAGKR--------DGYMIADPNSNGFFVCQC-------QCPIAMPCSEGL---- 285
            ||| .|.:...|....        |.|...:        |.|       :||....|.||.    
Mouse   279 PSG-PCDAGWYCVSAAWNARPFDLDNYTSTN--------CLCPATATGGKCPAGSYCPEGSPEPI 334

  Fly   286 -----KFNETAQVCDWIKDTKSAIGSSAVQCYGDLVYNATLDQ-----CDYPENYVP-----KVE 335
                 .|..|:.:     .|.:....:...|.|.....|.:|:     |. |.:|.|     ...
Mouse   335 PCTPGSFCATSGL-----PTPTGPCQAGYFCIGGSESPAPVDEVTGGPCP-PGSYCPVASHKPTP 393

  Fly   336 C----------NTTSTVCQNQPEGELFPVEGKCNMFYKCNFNC------AVEQYCPNNLVYNPNT 384
            |          .|||:.|::.|.|                |.|      |...:||.....:.:|
Mouse   394 CPVGTFSSLPEQTTSSTCRSCPSG----------------FYCKEAGLQAPSGWCPAGYYCDSST 442

  Fly   385 EECEYPQDYVCPWEYTPPSGP-----NAGPSGIACESNGRCMGQREGTYLKSTTNC 435
            ...:....|.||..|..|.|.     ::.|.|        ..|.|:|  |.|.|.|
Mouse   443 GPVQDFSLYPCPRGYYCPVGTTKAMYHSCPVG--------TYGPRKG--LTSITEC 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7252NP_648527.1 CBM_14 30..79 CDD:279884 8/53 (15%)
CBM_14 175..226 CDD:279884 16/65 (25%)
CBM_14 251..296 CDD:279884 12/68 (18%)
CBM_14 343..394 CDD:279884 9/56 (16%)
CBM_14 420..471 CDD:279884 7/16 (44%)
Gm30500XP_017171830.1 TNFRSF 394..518 CDD:389949 28/121 (23%)
CRD1 394..411 CDD:276900 4/16 (25%)
CRD2 414..451 CDD:276900 8/52 (15%)
CRD3 453..506 CDD:276900 14/46 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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