DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5883 and pear1

DIOPT Version :9

Sequence 1:NP_648526.2 Gene:CG5883 / 39352 FlyBaseID:FBgn0036225 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_700533.4 Gene:pear1 / 571812 ZFINID:ZDB-GENE-091230-1 Length:1020 Species:Danio rerio


Alignment Length:405 Identity:81/405 - (20%)
Similarity:123/405 - (30%) Gaps:162/405 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GSCSES---IICQNFESTPGITCSGSKPYYSKSKGSCQASADTYCDTSKICKGSGT-----GYIG 104
            |.|:::   .:|:  :...|..|..|.|...:....|.      |....||:|:|.     |::|
Zfish   198 GICNQTTGECVCK--QGFTGTLCEESCPRPKRCAARCP------CQNGGICQGNGVCLCPPGWMG 254

  Fly   105 DT-----------INCA------NWYYCDADALLGKGTCNLGMYFDQVSKSC---VYSEDT--VC 147
            ..           |||:      |..:||.:.  |:..|:.|...::.::.|   .|.||.  ||
Zfish   255 PVCTERCPPGRFGINCSKDCLCHNGGHCDQEK--GQCQCDAGYTGERCNEECPVGTYGEDCKGVC 317

  Fly   148 -----AAKYEI--------------CD------------------VAPVGT----PFRDDANCHK 171
                 |..|.|              ||                  ..|:.|    |.:.:..|..
Zfish   318 DCANGARCYNIHGGCLCEPGFKGPRCDHRMCPEAVFGMHCQHRCLCNPLNTLSCHPLKGECTCQP 382

  Fly   172 YYT---CSSKSLVENTCENGLYYNVATGTCVRKKDVICENHPLPDEVCGN------------KKL 221
            .:.   |:      .||..|.|.|.....|      :|.|..:.|.|.|.            :||
Zfish   383 GWAGLYCN------ETCAQGYYGNGCLEPC------LCVNGGVCDSVTGQCHCPPGFTGLHCEKL 435

  Fly   222 AVRNKFVSD--MATCR-----------GYYYCRDLGSGIPDTDPIYQQCDENNFFNQERQACMPR 273
            . .:.|...  ::.|:           |...|::...| ||..   ..|.|..:.....:.|...
Zfish   436 C-EDGFYGKGCLSACKCVNSIVCSPVDGACICKEGWRG-PDCS---IACSEGTWGPGCNRTCKCT 495

  Fly   274 ESQKCDYDRCDGR---KDGFEVAEID----------GCHHYIECV--DGRET-----------TP 312
            ....|  |..||.   ..|:..|..|          ||.:..:||  :|.|:           |.
Zfish   496 NGASC--DPADGSCKCTAGWRGASCDEPCLIGTFGPGCQNQCDCVHDEGCESVTGQCLCLPGWTG 558

  Fly   313 ISCEDKYFDVVTQNC 327
            :.|        ||.|
Zfish   559 VRC--------TQQC 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5883NP_648526.2 CBM_14 95..146 CDD:279884 18/77 (23%)
CBM_14 154..204 CDD:279884 13/74 (18%)
pear1XP_700533.4 EMI 29..96 CDD:284877
Laminin_EGF 411..451 CDD:278482 7/40 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D561378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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