DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5883 and NimA

DIOPT Version :9

Sequence 1:NP_648526.2 Gene:CG5883 / 39352 FlyBaseID:FBgn0036225 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001285918.1 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster


Alignment Length:171 Identity:41/171 - (23%)
Similarity:57/171 - (33%) Gaps:53/171 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NFESTPGITCSGSKPYYSKSKGSCQASADTYCDTSKICKGS---GTGYIGDTINCANWYY----- 114
            |...|....|.|.:...|.|:.:|:          .||:|.   |:..:.|..:|...|.     
  Fly   104 NKTRTVRFCCQGYEGNLSDSQATCK----------PICRGGCGRGSCVMPDICSCEEGYIGKHCT 158

  Fly   115 --CDAD--ALLGKGTCNL--GMYFDQVSKSCVYSEDTVCAAKY--EICDV-APVGTPFRDDANCH 170
              ||.|  .|..|..|..  |...|..|..|      .|.|.:  :.|:: .|.||   ....|.
  Fly   159 QRCDHDRWGLDCKNLCQCQNGAACDNKSGLC------HCIAGWTGQFCELPCPQGT---YGIMCR 214

  Fly   171 KYYTCSSKSLVENTCENGLYYNVATGTCVRKKDVICENHPL 211
            |...|.     |..|      |..||.|::      ::.||
  Fly   215 KACDCD-----EKPC------NPQTGACIQ------QDQPL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5883NP_648526.2 CBM_14 95..146 CDD:279884 16/64 (25%)
CBM_14 154..204 CDD:279884 13/50 (26%)
NimANP_001285918.1 EMI 52..116 CDD:284877 3/11 (27%)
EGF_2 170..200 CDD:285248 8/35 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D561378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.010

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