DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5883 and pear1

DIOPT Version :9

Sequence 1:NP_648526.2 Gene:CG5883 / 39352 FlyBaseID:FBgn0036225 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_017952446.2 Gene:pear1 / 100489801 XenbaseID:XB-GENE-6045593 Length:1087 Species:Xenopus tropicalis


Alignment Length:403 Identity:84/403 - (20%)
Similarity:120/403 - (29%) Gaps:156/403 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GSCSESIICQNFESTPGITCSGSK-----------PY-------YSKSKGSCQASADTYCDTSKI 94
            |.||.|..|:|     |..|....           ||       ...:..||  |....|.:..|
 Frog   187 GGCSLSCQCKN-----GAECDPENGACLCPEGYTGPYCEIRCKEVQPANFSC--SDQCLCQSGGI 244

  Fly    95 CKGSG------TGYIGD--TINCANWYY---CDADALLGKGTCNLGMYFDQVSKSCVYSEDTVCA 148
            |..|.      .|::|.  :|.|.:.||   |..:.|     |:.|...|..:..|:.||.....
 Frog   245 CNQSSGECSCPPGWMGSLCSIPCPDGYYGRNCKQECL-----CHNGGQCDPKTGQCLCSEGYTGD 304

  Fly   149 AKYEICDVAPVGTPFRDDANCHKYYTC-------------SSKSLVENTCENGLYYNVATGTCVR 200
            ...|.|.:...|....:..:|.....|             ..::..|..|..|||.......|  
 Frog   305 HCREECPIGKYGKDCSEKCDCINAVRCYHINGGCLCEHGFKGEACDERMCPPGLYGMPCNLRC-- 367

  Fly   201 KKDVICEN------HPLPDE-VCGNKKLAVRNKFVSDMATC-RGYY------YCRDLGSGIPDTD 251
                :|:.      ||:..| .|   |......:.::  || .|||      .|..|..|..|::
 Frog   368 ----LCDPLHSQSCHPMSGECAC---KPGWSGLYCNE--TCPHGYYGTNCQELCVCLNGGSCDSE 423

  Fly   252 -------PIY--QQCDENNFFNQERQACMPRESQKCDYDRCDGRKDGFEVAEIDG---------- 297
                   |.:  .||  :::...|...  |:.||||      |.|:....:.|||          
 Frog   424 TGECICAPGFTGPQC--SSYCPMETYG--PKCSQKC------GCKNSLACSPIDGSCVCKEGWQK 478

  Fly   298 ---------------CHHYIECVDGRETTPIS-----------------CEDKYF---------- 320
                           |:...||.:|...:|||                 |:|..|          
 Frog   479 GDCSVPCPKGTWGYNCNRTCECNNGASCSPISGLCSCTSGWHGDKCEQPCKDGTFGPGCRQQCEC 543

  Fly   321 ------DVVTQNC 327
                  |.:|..|
 Frog   544 ENSDNCDPITGQC 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5883NP_648526.2 CBM_14 95..146 CDD:279884 16/61 (26%)
CBM_14 154..204 CDD:279884 10/62 (16%)
pear1XP_017952446.2 EMI 29..97 CDD:400092
exchanger_TraA <147..>310 CDD:411343 32/134 (24%)
exchanger_TraA <416..729 CDD:411343 29/151 (19%)
Laminin_EGF 546..586 CDD:395007 3/11 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D561378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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