Protein Alignment Rpt4R and YME1

DIOPT Version :10

• Sequence 1: NP_648525.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_015349.1
• Gene: YME1 / 856135
• SGDID: S000006228
• Length: 747
• Species: Saccharomyces cerevisiae
• Alignment Length: 255
• Identity: 94/255 - (36%)
• Similarity: 145/255 - (56%)
• Gaps: 7/255 - (2%)

  Fly   138 NVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDA 202
            ||.:.::.|..:...||.|:::. |.:|..:..:|...|||.||.|||||||||||||.|.:...
Yeast   277 NVKFDDVCGCDEARAELEEIVDF-LKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGV 340

  Fly   203 NFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 267
            :|..:..|...:.|:|..|:.||::||.||...|.|||:||:|||||:|..:..:..::   ||.
Yeast   341 DFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAYAKQ---TLN 402

  Fly   268 ELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKR 332
            :||.::|||.....:.:|.|||.|:.||.||.||||.|:.:.:.||:...|.||||.|.:.:...
Yeast   403 QLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLA 467

  Fly   333 GEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKI---ADNKKL 389
            ..:|...:.:.:...:||:|.|:..:|.::|.:.:...|....|..|..||   |:.|.:
Yeast   468 DNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTM 527

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_648525.1	PRK03992	13..388	CDD:179699	93/252 (37%)
YME1	NP_015349.1	HflB	<269..709	CDD:440233	94/255 (37%)