DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4R and RPT1A

DIOPT Version :10

Sequence 1:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_175778.1 Gene:RPT1A / 841812 AraportID:AT1G53750 Length:426 Species:Arabidopsis thaliana


Alignment Length:397 Identity:170/397 - (42%)
Similarity:253/397 - (63%) Gaps:21/397 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NP-PTDDERVRALTNY-------RTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVG 63
            || |.|::.:..|..|       ..|.:| :||:...|.:.|...:..::...:......|.|..
plant    14 NPRPLDEDDIALLKTYGLGPYSAPIKKVE-KEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDK 77

  Fly    64 QMVGE-----------ILKQLTPD-NFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTI 116
            ||:.|           |:...|.| .:::......::|||...:::...::.|.||.:|.....|
plant    78 QMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQI 142

  Fly   117 MRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLL 181
            ...||.::||.|..||.|:..:|.|.::||..:||.::|||:|||:|:|:.|:::||.||||.|.
plant   143 QIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLC 207

  Fly   182 YGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDA 246
            ||||||||||||||:|::.||.|::|:.|.:|.||:||.||::||:|..||..:.||:|.||:||
plant   208 YGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272

  Fly   247 IGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIP 311
            |||.||.:|...|.|:|||::|::||:|||||.|.:|::||||||||||||||||||||||:|..
plant   273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337

  Fly   312 LPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDF 376
            ||:..:|..|.|||...:|...:|.:|.:.:|.....|||:|::|||||::|:|..|:.|.::||
plant   338 LPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402

  Fly   377 MKAVRKI 383
            :.||.|:
plant   403 LDAVNKV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 166/390 (43%)
RPT1ANP_175778.1 PRK03992 113..423 CDD:179699 150/297 (51%)

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