DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4R and RPT3

DIOPT Version :10

Sequence 1:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_200637.1 Gene:RPT3 / 835941 AraportID:AT5G58290 Length:408 Species:Arabidopsis thaliana


Alignment Length:402 Identity:165/402 - (41%)
Similarity:254/402 - (63%) Gaps:18/402 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PLANP-----PTDDE-----RVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKA 58
            |.|:|     .|.||     |:::|    .:.||..:|:.:.  ::|:.|.:..|..::::::|.
plant    13 PKASPALMDLSTADEEDLYGRLKSL----ERQLEFTDIQEEY--VKDEQKNLKRELLRAQEEVKR 71

  Fly    59 LQSVGQMVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPRE 123
            :|||..::|:.::.:..:|.||.::.|..|.|.....||:|.|||...|||...:..::..||.|
plant    72 IQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPE 136

  Fly   124 VDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTG 188
            .|..:..::..:..:|:|.:|||...|.:|:||.:||||.:.:::.::||.||:|.|||||||||
plant   137 ADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTG 201

  Fly   189 KTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFS 253
            ||:||:|:|:...|.|::||.|..|.||:||..|::|::|..|:::.|.|||:||:|||...||.
plant   202 KTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFD 266

  Fly   254 EGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVAR 318
            ..|.||||:||.||||||||||||....||:||||||.||||||||||||||||:|.|||:...:
plant   267 AQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 331

  Fly   319 MDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKI 383
            ..:.::....:|...|:|.|..|...|..:.|::..||.|||:.|:|.:|..::.:||.|..|  
plant   332 RLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR-- 394

  Fly   384 ADNKKLESRLDY 395
            |:.||.::..::
plant   395 ANVKKPDTDFEF 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 158/379 (42%)
RPT3NP_200637.1 PTZ00454 15..408 CDD:240423 164/400 (41%)

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