DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4R and FtsHi1

DIOPT Version :10

Sequence 1:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_567691.1 Gene:FtsHi1 / 828494 AraportID:AT4G23940 Length:946 Species:Arabidopsis thaliana


Alignment Length:253 Identity:102/253 - (40%)
Similarity:153/253 - (60%) Gaps:9/253 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 VNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDAN 203
            |.:|::.|:.:.:.||:|:::. |.|||:|.::||.||.|.||.||||.||||:|:|||.:....
plant   427 VKFADVAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVP 490

  Fly   204 FLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRR---FSEGT-----SADR 260
            |.::..|..|:..:|..:..||::|..|:.::|.:||:|||||:..||   |.|.:     :|.:
plant   491 FYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQ 555

  Fly   261 EIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIH 325
            |.:.||.:||.::||||....|..:.||||.|.||||||||||.|||:.:..||...|:||||||
plant   556 ERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIH 620

  Fly   326 AEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKI 383
            |..:.....:|..:.......::||.|..:..||.|.|:|.....::|.|...||.::
plant   621 ASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAVDRL 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 102/253 (40%)
FtsHi1NP_567691.1 HflB <412..899 CDD:440233 102/253 (40%)

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