Sequence 1: | NP_001287039.1 | Gene: | Rpt4R / 39351 | FlyBaseID: | FBgn0036224 | Length: | 398 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112411.1 | Gene: | Psmc5 / 81827 | RGDID: | 708376 | Length: | 406 | Species: | Rattus norvegicus |
Alignment Length: | 386 | Identity: | 175/386 - (45%) |
---|---|---|---|
Similarity: | 251/386 - (65%) | Gaps: | 10/386 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 ERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPDN 77
Fly 78 FIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYA 142
Fly 143 EIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKV 207
Fly 208 VSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 272
Fly 273 MDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDY 337
Fly 338 EAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDYKPI 398 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rpt4R | NP_001287039.1 | RPT1 | 13..396 | CDD:224143 | 174/382 (46%) |
AAA | 180..312 | CDD:278434 | 82/131 (63%) | ||
Psmc5 | NP_112411.1 | RPT1 | 4..404 | CDD:224143 | 175/384 (46%) |
May mediate interaction with PRPF9. /evidence=ECO:0000250|UniProtKB:P62196 | 186..406 | 119/220 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D298123at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |