DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4R and PSMC4

DIOPT Version :10

Sequence 1:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_006494.1 Gene:PSMC4 / 5704 HGNCID:9551 Length:418 Species:Homo sapiens


Alignment Length:392 Identity:162/392 - (41%)
Similarity:245/392 - (62%) Gaps:3/392 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEI 69
            |...|.|.|.:.:......:.||..|::.:.  ::|:.|.:..|:..:::::|.:||:..::|:.
Human    30 LGPEPEDLEDLYSRYKKLQQELEFLEVQEEY--IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQF 92

  Fly    70 LKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHE 134
            |:.:..:..||.::.|..|.|.....|::|.|||...|||...:..::..||.|.|..:..:|.:
Human    93 LEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSD 157

  Fly   135 DPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQ 199
            ...:|.||:|||:..|.:|:||.:||||.:.:::.::||.||:|.|:|||||.|||:||:|:|..
Human   158 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222

  Fly   200 MDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 264
            ..|.|::||.|..|.||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||
Human   223 TTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287

  Fly   265 TLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPL 329
            .|:||||||||||....||:||||||.||||||||||||||||:|.|||:...:..|.......:
Human   288 ILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352

  Fly   330 NKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLD 394
            |...|:|.|..|...|..:|||:.:||.|:|:.|:|.:|..|:.:||.||.:.:....:.|... 
Human   353 NLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF- 416

  Fly   395 YK 396
            ||
Human   417 YK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 156/374 (42%)
PSMC4NP_006494.1 PTZ00454 34..418 CDD:240423 159/386 (41%)

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