DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4R and PSMC3

DIOPT Version :10

Sequence 1:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_002795.2 Gene:PSMC3 / 5702 HGNCID:9549 Length:439 Species:Homo sapiens


Alignment Length:403 Identity:164/403 - (40%)
Similarity:240/403 - (59%) Gaps:38/403 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RTKLLEHR---------EIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPD- 76
            ||:||:..         .:..:|:|::||.|      |.|| .:|..:::..:|..:::.|..| 
Human    44 RTRLLDSEIKIMKSEVLRVTHELQAMKDKIK------ENSE-KIKVNKTLPYLVSNVIELLDVDP 101

  Fly    77 --------NF-----------IVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPR 122
                    |.           ::|.|....|.:.....::.||||||..|.::..:..|:..||.
Human   102 NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPT 166

  Fly   123 EVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGT 187
            |.|..|..|..::.....|::||||.:||:||.|.|.||:.:.:.|..:||.||||.|:||||||
Human   167 EYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231

  Fly   188 GKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRF 252
            ||||||||.|:|..|.|||:....:|..:||:.|:|:|:.||.|::..|.|||:||:||||.:||
Human   232 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 296

  Fly   253 SEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
            ....:.|||:|||::|||||:|||....|||:|.||||.|.|||||||.||||||:|.|:|||.|
Human   297 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361

  Fly   318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRK 382
            |..|::||:..:|...:::||.:.:.:|.||||..:.:|.|||:.|||.....:..||:|:.:.:
Human   362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILE 426

  Fly   383 IADNKKLESRLDY 395
            :...||  :.|.|
Human   427 VQAKKK--ANLQY 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 160/394 (41%)
PSMC3NP_002795.2 PRK03992 39..432 CDD:179699 160/394 (41%)

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