Protein Alignment Rpt4R and psmc5

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_001003740.1
• Gene: psmc5 / 445285
• ZFINID: ZDB-GENE-030131-6547
• Length: 406
• Species: Danio rerio
• Alignment Length: 382
• Identity: 175/382 - (45%)
• Similarity: 246/382 - (64%)
• Gaps: 5/382 - (1%)

  Fly    21 YRTKL----LEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPDNFIVK 81
            |.:|:    |...|....|:.|:.:...:||:.....::|:.||..|..|||:::.:.....:||
Zfish    24 YLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVK 88

  Fly    82 ASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGG 146
            .....::||...:.|:...:.|..||||...:.|:.:.||.:|||||..|..|...:..|..|||
Zfish    89 VHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153

  Fly   147 LGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSA 211
            |.:||:|::||||||:.:|::|..:||:.|||.||||||||||||||||:|...|..|::|..|.
Zfish   154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 218

  Fly   212 IVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 276
            :|.|:|||.||::||:|..||:|.|.||||||||:||..|...|:..|.|:|||::|||||:|||
Zfish   219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 283

  Fly   277 DALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVV 341
            :|...:|:||||||.|.||.|||||||:|||:|.|.|||.||:||||||:..:|....|:...:.
Zfish   284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 348

  Fly   342 KLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDYKPI 398
            :|....:||:::.:|||||::|||..|..|.||||..||.|:. .|..|..:..|.:
Zfish   349 ELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM-QKDSEKNMSIKKL 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	174/378 (46%)
		AAA	180..312	CDD:278434	82/131 (63%)
psmc5	NP_001003740.1	RPT1	4..404	CDD:224143	175/380 (46%)
		AAA_16	153..>206	CDD:289934	35/52 (67%)
		AAA	186..318	CDD:278434	82/131 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920