Protein Alignment Rpt4R and Rpt6R

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Alignment Length: 381
• Identity: 172/381 - (45%)
• Similarity: 246/381 - (64%)
• Gaps: 20/381 - (5%)

  Fly    10 TDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLT 74
            |.:||.:.|...:.   :..|:..|::.||              ::|:.||..|..:.|::|.:.
  Fly    28 TVNERQKNLLRLQA---QRNELNLKVRLLR--------------EELQLLQEQGSYIAEVVKPMD 75

  Fly    75 PDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNV 139
            .:..:||.....:|||...:.||.:.:.|.:||||...:.|:.:.||.:|||||..|..|...:.
  Fly    76 KNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDS 140

  Fly   140 NYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANF 204
            .|..:|||.:||:|::||||||:.:|::|..:||:.|||.||||||||||||||||:|...:..|
  Fly   141 TYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTF 205

  Fly   205 LKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 269
            ::|..|.:|.|:|||.:|::||:|..||:|.|.||||||||:||..|...|| .|.|:|||::||
  Fly   206 IRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLEL 269

  Fly   270 LNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGE 334
            |||:|||:|...:|:||||||.|.||.|||||||:|||:|.|.|||.||:||||||:..:|....
  Fly   270 LNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG 334

  Fly   335 IDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKI--ADNKK 388
            |:...:.:.....:||:::.:|||||::|||..|..|.||||..||.|:  .|::|
  Fly   335 INLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEK 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	171/378 (45%)
		AAA	180..312	CDD:278434	81/131 (62%)
Rpt6R	NP_651811.1	RPT1	3..396	CDD:224143	172/381 (45%)
		AAA	180..311	CDD:278434	81/131 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45445441
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950