Protein Alignment Rpt4R and Rpt3R

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_649938.2
• Gene: Rpt3R / 41190
• FlyBaseID: FBgn0037742
• Length: 405
• Species: Drosophila melanogaster
• Alignment Length: 366
• Identity: 147/366 - (40%)
• Similarity: 238/366 - (65%)
• Gaps: 4/366 - (1%)

  Fly    21 YRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPDNFIVKASNG 85
            |:...:|...|:.:...::::.:.:..|:..:::::|.:::|..::|:.|:.:..:|.||.::.|
  Fly    31 YKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTG 95

  Fly    86 PRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQ 150
            ..|.|.....|::|:|||.:.|.|...:..::..:|.|.|..:..::.::..:::|::||||..|
  Fly    96 SNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQ 160

  Fly   151 IRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDK 215
            .:|:||.:||||.:..::.::||.||:|.||:||||.|||:||:|:|....|:|::||.|..|.|
  Fly   161 KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQK 225

  Fly   216 YIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALG 280
            |:||..|::|::|..|:.:.|.|||:||||||..:||...|.||||:||.|:||||||||||...
  Fly   226 YLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETT 290

  Fly   281 QVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSD 345
            .:|:||||||.||||||||||||||||:|:|||:...:..:.......:|...::|.|.::...|
  Fly   291 NIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPD 355

  Fly   346 LFNGADLRNICTEAGLFALRCDREFVIQEDFMK----AVRK 382
            ..:.||:..||.|||:.|:|.:|..|..:||.|    :|||
  Fly   356 KISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRK 396

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	147/366 (40%)
		AAA	180..312	CDD:278434	81/131 (62%)
Rpt3R	NP_649938.2	PTZ00454	20..405	CDD:240423	147/366 (40%)
		AAA	189..322	CDD:278434	81/132 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45445425
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850