Protein Alignment Rpt4R and psmc2

DIOPT Version :9

• Sequence 1: NP_001287039.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_989155.1
• Gene: psmc2 / 394760
• XenbaseID: XB-GENE-1000016
• Length: 433
• Species: Xenopus tropicalis
• Alignment Length: 399
• Identity: 165/399 - (41%)
• Similarity: 246/399 - (61%)
• Gaps: 26/399 - (6%)

  Fly    11 DDERVRALTNYRTKLL----------EHREIESKLKALRDKYKVVNAEYEKSED----------- 54
            :|:.:|:|......||          :.:::|..::.|..|...:....|....
 Frog    18 EDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAA 82

  Fly    55 DLKALQSVGQM-VGEILKQLTPDN----FIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTL 114
            |.:.|||...: |....|.:..|:    :|:......::||....|:....::.|.||.:|....
 Frog    83 DKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKY 147

  Fly   115 TIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGC 179
            .|...||.::||.|..|..|:..:|.|:::||..:||.:||||:|.|||:|:.|:.:||.||||.
 Frog   148 QIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212

  Fly   180 LLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEI 244
            ||:|||||||||.|||:|::.||.|::|:.|.:|.||:||.||::||:|..||..:.|:||.|||
 Frog   213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277

  Fly   245 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLE 309
            |||||.||.:|...|.|:|||::||:||:||||..|.:|::|||||||||||||:||||||||:|
 Frog   278 DAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

  Fly   310 IPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQE 374
            ..||:...|..|.||||..::...:|.:|.:.:|.....||::|::|||||:||:|..|:...::
 Frog   343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEK 407

  Fly   375 DFMKAVRKI 383
            ||::||.|:
 Frog   408 DFLEAVNKV 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4R	NP_001287039.1	RPT1	13..396	CDD:224143	164/397 (41%)
		AAA	180..312	CDD:278434	83/131 (63%)
psmc2	NP_989155.1	RPT1	33..430	CDD:224143	161/384 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010